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SYT14P1 synaptotagmin 14 pseudogene 1 [ Homo sapiens (human) ]

Gene ID: 401135, updated on 3-Sep-2017
Official Symbol
SYT14P1provided by HGNC
Official Full Name
synaptotagmin 14 pseudogene 1provided by HGNC
Primary source
HGNC:HGNC:33429
See related
MIM:610892
Gene type
pseudo
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
SYT14L; SYTDEP; CHR415SYT
Expression
Low expression observed in reference dataset See more
Location:
4q13.2
Exon count:
2
Annotation release Status Assembly Chr Location
108 current GRCh38.p7 (GCF_000001405.33) 4 NC_000004.12 (68060610..68063297, complement)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 4 NC_000004.11 (68926328..68929015, complement)

Chromosome 4 - NC_000004.12Genomic Context describing neighboring genes Neighboring gene RNA, U6 small nuclear 95, pseudogene Neighboring gene GRINL1B complex locus 2 (pseudogene) Neighboring gene transmembrane protease, serine 11F Neighboring gene uncharacterized LOC550113 Neighboring gene solute carrier family 47 member 2 pseudogene Neighboring gene TMPRSS11B N-terminal like, pseudogene Neighboring gene ferritin light chain pseudogene 10

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Jun 15 11:32:44 2016

Related articles in PubMed

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Markers

Other Names

  • chr415 synaptotagmin
  • synaptotagmin XIV pseudogene 1
  • synaptotagmin XIV-derived
  • synaptotagmin XIV-like

Gene Ontology Provided by GOA

Function Evidence Code Pubs
calcium ion binding IBA
Inferred from Biological aspect of Ancestor
more info
 
NOT calcium-dependent phospholipid binding IBA
Inferred from Biological aspect of Ancestor
more info
 
clathrin binding IBA
Inferred from Biological aspect of Ancestor
more info
 
syntaxin binding IBA
Inferred from Biological aspect of Ancestor
more info
 
Process Evidence Code Pubs
NOT calcium ion-regulated exocytosis of neurotransmitter IBA
Inferred from Biological aspect of Ancestor
more info
 
positive regulation of CREB transcription factor activity IMP
Inferred from Mutant Phenotype
more info
PubMed 
positive regulation of ERK1 and ERK2 cascade IMP
Inferred from Mutant Phenotype
more info
PubMed 
positive regulation of dendrite extension IMP
Inferred from Mutant Phenotype
more info
PubMed 
NOT regulation of calcium ion-dependent exocytosis IBA
Inferred from Biological aspect of Ancestor
more info
 
vesicle fusion IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
 

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_027094.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AY954513, BC132697, CR740599

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 108

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p7 Primary Assembly

Genomic

  1. NC_000004.12 Reference GRCh38.p7 Primary Assembly

    Range
    68060610..68063297 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate CHM1_1.1

Genomic

  1. NC_018915.2 Alternate CHM1_1.1

    Range
    68963321..68966008 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001014372.3: Suppressed sequence

    Description
    NM_001014372.3: This RefSeq was permanently suppressed because it is now thought that this gene is a pseudogene.
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