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LINC01121 long intergenic non-protein coding RNA 1121 [ Homo sapiens (human) ]

Gene ID: 400952, updated on 25-Jan-2022

Summary

Official Symbol
LINC01121provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 1121provided by HGNC
Primary source
HGNC:HGNC:49266
See related
Ensembl:ENSG00000205054 AllianceGenome:HGNC:49266
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
UNQ6975
Expression
Low expression observed in reference dataset See more
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Genomic context

See LINC01121 in Genome Data Viewer
Location:
2p21
Exon count:
6
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 2 NC_000002.12 (45174341..45254941, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (45401480..45482080, complement)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene SIX homeobox 2 Neighboring gene uncharacterized LOC107985809 Neighboring gene uncharacterized LOC105374576 Neighboring gene uncharacterized LOC105374577 Neighboring gene Sharpr-MPRA regulatory region 15185 Neighboring gene S1 RNA binding domain 1

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General gene information

Markers

Other Names

  • NGNL6975

Clone Names

  • FLJ38231

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_033831.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AW291903, AY358255
    Related
    ENST00000378479.5

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p13 Primary Assembly

    Range
    45174341..45254941 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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