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FAM177B family with sequence similarity 177 member B [ Homo sapiens (human) ]

Gene ID: 400823, updated on 2-Apr-2017
Official Symbol
FAM177Bprovided by HGNC
Official Full Name
family with sequence similarity 177 member Bprovided by HGNC
Primary source
HGNC:HGNC:34395
See related
Ensembl:ENSG00000197520 Vega:OTTHUMG00000037766
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Orthologs
Location:
1q41
Exon count:
10
Annotation release Status Assembly Chr Location
108 current GRCh38.p7 (GCF_000001405.33) 1 NC_000001.11 (222737216..222772193)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (222910558..222926932)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene axin interactor, dorsalization associated Neighboring gene uncharacterized LOC105372984 Neighboring gene BRO1 domain and CAAX motif containing Neighboring gene dispatched RND transporter family member 1 Neighboring gene NADH:ubiquinone oxidoreductase subunit B1 pseudogene 2 Neighboring gene uncharacterized LOC102724046

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Jun 15 11:32:44 2016

Markers

Homology

Clone Names

  • FLJ43505

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001324080.1NP_001311009.1  protein FAM177B

    Status: VALIDATED

    Source sequence(s)
    AL392172
    Consensus CDS
    CCDS1535.2
    UniProtKB/Swiss-Prot
    A6PVY3
    Related
    ENSP00000414451.2, ENST00000445590.3
    Conserved Domains (1) summary
    pfam14774
    Location:8120
    FAM177; FAM177 family
  2. NM_207468.2NP_997351.2  protein FAM177B

    See identical proteins and their annotated locations for NP_997351.2

    Status: VALIDATED

    Source sequence(s)
    AL392172, CA848039
    Consensus CDS
    CCDS1535.2
    UniProtKB/Swiss-Prot
    A6PVY3
    Conserved Domains (1) summary
    pfam14774
    Location:8120
    FAM177; FAM177 family

RNA

  1. NR_136691.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AK125494
    Related
    ENST00000391880.6, OTTHUMT00000092149

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 108 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p7 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p7 Primary Assembly

    Range
    222737216..222772193
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017001280.1XP_016856769.1  protein FAM177B isoform X1

    UniProtKB/Swiss-Prot
    A6PVY3
    Related
    ENSP00000354070.2, OTTHUMP00000196557, ENST00000360827.6, OTTHUMT00000092151
    Conserved Domains (1) summary
    pfam14774
    Location:8120
    FAM177; FAM177 family
  2. XM_017001285.1XP_016856774.1  protein FAM177B isoform X4

  3. XM_017001283.1XP_016856772.1  protein FAM177B isoform X2

  4. XM_017001284.1XP_016856773.1  protein FAM177B isoform X3

  5. XM_017001281.1XP_016856770.1  protein FAM177B isoform X1

    UniProtKB/Swiss-Prot
    A6PVY3
    Conserved Domains (1) summary
    pfam14774
    Location:8120
    FAM177; FAM177 family
  6. XM_017001279.1XP_016856768.1  protein FAM177B isoform X1

    UniProtKB/Swiss-Prot
    A6PVY3
    Conserved Domains (1) summary
    pfam14774
    Location:8120
    FAM177; FAM177 family
  7. XM_017001282.1XP_016856771.1  protein FAM177B isoform X1

    UniProtKB/Swiss-Prot
    A6PVY3
    Conserved Domains (1) summary
    pfam14774
    Location:8120
    FAM177; FAM177 family

Alternate CHM1_1.1

Genomic

  1. NC_018912.2 Alternate CHM1_1.1

    Range
    224183624..224197212
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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