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NCMAP non-compact myelin associated protein [ Homo sapiens (human) ]

Gene ID: 400746, updated on 1-Jun-2020

Summary

Official Symbol
NCMAPprovided by HGNC
Official Full Name
non-compact myelin associated proteinprovided by HGNC
Primary source
HGNC:HGNC:29332
See related
Ensembl:ENSG00000184454
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
MP11; C1orf130
Expression
Biased expression in gall bladder (RPKM 3.2), thyroid (RPKM 2.0) and 12 other tissues See more
Orthologs

Genomic context

See NCMAP in Genome Data Viewer
Location:
1p36.11
Exon count:
6
Annotation release Status Assembly Chr Location
109.20200522 current GRCh38.p13 (GCF_000001405.39) 1 NC_000001.11 (24556087..24609328)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (24882567..24935819)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene RCAN3 antisense RNA Neighboring gene RCAN family member 3 Neighboring gene Sharpr-MPRA regulatory region 2491 Neighboring gene NCMAP divergent transcript Neighboring gene ribosomal protein L26 pseudogene 8 Neighboring gene serine and arginine repetitive matrix 1 Neighboring gene Sharpr-MPRA regulatory region 6401

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General gene information

Markers

Homology

Clone Names

  • FLJ42528

Gene Ontology Provided by GOA

Function Evidence Code Pubs
structural constituent of myelin sheath IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
structural constituent of myelin sheath ISS
Inferred from Sequence or Structural Similarity
more info
 
Process Evidence Code Pubs
peripheral nervous system myelin formation IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
peripheral nervous system myelin formation ISS
Inferred from Sequence or Structural Similarity
more info
 
positive regulation of myelination ISS
Inferred from Sequence or Structural Similarity
more info
 
Component Evidence Code Pubs
Schmidt-Lanterman incisure IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Schmidt-Lanterman incisure ISS
Inferred from Sequence or Structural Similarity
more info
 
integral component of plasma membrane ISS
Inferred from Sequence or Structural Similarity
more info
 
paranode region of axon IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
paranode region of axon ISS
Inferred from Sequence or Structural Similarity
more info
 

General protein information

Preferred Names
noncompact myelin-associated protein
Names
myelin protein of 11 kDa

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001010980.5NP_001010980.1  noncompact myelin-associated protein

    See identical proteins and their annotated locations for NP_001010980.1

    Status: VALIDATED

    Source sequence(s)
    AL445686, BC147014, CB961010
    Consensus CDS
    CCDS30632.1
    UniProtKB/Swiss-Prot
    Q5T1S8
    Related
    ENSP00000363513.2, ENST00000374392.3

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p13 Primary Assembly

    Range
    24556087..24609328
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011541463.2XP_011539765.1  noncompact myelin-associated protein isoform X1

    See identical proteins and their annotated locations for XP_011539765.1

    UniProtKB/Swiss-Prot
    Q5T1S8
  2. XM_005245872.3XP_005245929.1  noncompact myelin-associated protein isoform X1

    See identical proteins and their annotated locations for XP_005245929.1

    UniProtKB/Swiss-Prot
    Q5T1S8
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