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TMEM132E-DT TMEM132E divergent transcript [ Homo sapiens (human) ]

Gene ID: 400591, updated on 1-Mar-2024

Summary

Official Symbol
TMEM132E-DTprovided by HGNC
Official Full Name
TMEM132E divergent transcriptprovided by HGNC
Primary source
HGNC:HGNC:34412
See related
Ensembl:ENSG00000197322 AllianceGenome:HGNC:34412
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
C17orf102
Expression
Low expression observed in reference dataset See more
Orthologs
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Genomic context

See TMEM132E-DT in Genome Data Viewer
Location:
17q12
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 17 NC_000017.11 (34574123..34579369, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 17 NC_060941.1 (35521150..35526396, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 17 NC_000017.10 (32901142..32906388, complement)

Chromosome 17 - NC_000017.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105371738 Neighboring gene uncharacterized LOC105371739 Neighboring gene MPRA-validated peak2809 silencer Neighboring gene NANOG hESC enhancer GRCh37_chr17:32836799-32837300 Neighboring gene MPRA-validated peak2810 silencer Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr17:32894480-32895679 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:32905553-32906089 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:32906090-32906625 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:32918804-32919304 Neighboring gene transmembrane protein 132E Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:32924388-32925207 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:32928161-32928949 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:32939734-32940312 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:32942973-32943573 Neighboring gene MPRA-validated peak2812 silencer Neighboring gene MPRA-validated peak2813 silencer Neighboring gene uncharacterized LOC105371740

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_160787.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC005691
    Related
    ENST00000623254.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000017.11 Reference GRCh38.p14 Primary Assembly

    Range
    34574123..34579369 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060941.1 Alternate T2T-CHM13v2.0

    Range
    35521150..35526396 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_207454.2: Suppressed sequence

    Description
    NM_207454.2: This RefSeq was removed because it is now thought that this gene does not encode a protein.