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LOC400541 uncharacterized LOC400541 [ Homo sapiens (human) ]

Gene ID: 400541, updated on 23-Nov-2021

Summary

Gene symbol
LOC400541
Gene description
uncharacterized LOC400541
See related
Ensembl:ENSG00000247228
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Ubiquitous expression in bone marrow (RPKM 31.9), thyroid (RPKM 27.5) and 24 other tissues See more
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Genomic context

See LOC400541 in Genome Data Viewer
Location:
16q22.1
Exon count:
3
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 16 NC_000016.10 (70156340..70173448, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 16 NC_000016.9 (70190243..70207351, complement)

Chromosome 16 - NC_000016.10Genomic Context describing neighboring genes Neighboring gene PDXDC2P-NPIPB14P readthrough Neighboring gene pyridoxal dependent decarboxylase domain containing 2, pseudogene Neighboring gene microRNA 1972-2 Neighboring gene ribosomal protein S10 pseudogene 24 Neighboring gene pyruvate dehydrogenase phosphatase regulatory subunit Neighboring gene uncharacterized LOC105371328 Neighboring gene C-type lectin domain family 18 member C Neighboring gene SMG1 pseudogene 7

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_126007.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC009060
    Related
    ENST00000566989.1

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000016.10 Reference GRCh38.p13 Primary Assembly

    Range
    70156340..70173448 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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