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LINC02389 long intergenic non-protein coding RNA 2389 [ Homo sapiens (human) ]

Gene ID: 400046, updated on 23-Nov-2021

Summary

Official Symbol
LINC02389provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 2389provided by HGNC
Primary source
HGNC:HGNC:53316
See related
Ensembl:ENSG00000255693
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

See LINC02389 in Genome Data Viewer
Location:
12q14.3
Exon count:
3
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 12 NC_000012.12 (64883774..64977522)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 12 NC_000012.11 (65277554..65371302)

Chromosome 12 - NC_000012.12Genomic Context describing neighboring genes Neighboring gene glucosamine (N-acetyl)-6-sulfatase Neighboring gene TBC1 domain family member 30 Neighboring gene ribosomal protein L7 pseudogene 39 Neighboring gene long intergenic non-protein coding RNA 2231 Neighboring gene RNA, U6atac small nuclear 42, pseudogene Neighboring gene uncharacterized LOC107984522 Neighboring gene WNT inhibitory factor 1 Neighboring gene RNA, U6 small nuclear 166, pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General gene information

Markers

Clone Names

  • FLJ41278

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_027727.1 RefSeqGene

    Range
    5001..98749
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. NR_033988.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC078815, AK123272, BU782746
    Related
    ENST00000535058.1

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000012.12 Reference GRCh38.p13 Primary Assembly

    Range
    64883774..64977522
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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