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Polr3D RNA polymerase III subunit D [ Drosophila melanogaster (fruit fly) ]

Gene ID: 40002, updated on 18-Sep-2024

Summary

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Official Symbol
Polr3Dprovided by FlyBase
Official Full Name
RNA polymerase III subunit Dprovided by FlyBase
Primary source
FLYBASE:FBgn0036775
Locus tag
Dmel_CG5147
See related
AllianceGenome:FB:FBgn0036775
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CG5147; dC53; Dmel\CG5147; Rpc53; RPC53; RpIIIC53
Summary
Predicted to enable DNA binding activity. Predicted to be involved in transcription by RNA polymerase III. Predicted to be part of RNA polymerase III complex. Is expressed in organism and spermatozoon. Orthologous to human POLR3D (RNA polymerase III subunit D). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
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Genomic context

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See Polr3D in Genome Data Viewer
Location:
75B9-75B9; 3-45 cM
Exon count:
4
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (18107848..18109574, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (18100948..18102674, complement)

Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene mitochondrial ribosomal protein S26 Neighboring gene mutagen-sensitive 304 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. RNA polymerase III limits longevity downstream of TORC1. Filer D, et al. Nature, 2017 Dec 14. PMID 29186112, Free PMC Article
  2. Regulation of chromatin organization and inducible gene expression by a Drosophila insulator. Wood AM, et al. Mol Cell, 2011 Oct 7. PMID 21981916, Free PMC Article
  3. In silico identification of Drosophila melanogaster genes encoding RNA polymerase subunits. Marygold SJ, et al. MicroPubl Biol, 2020 Oct 20. PMID 33274328, Free PMC Article
  4. Drosophila histone locus bodies form by hierarchical recruitment of components. White AE, et al. J Cell Biol, 2011 May 16. PMID 21576393, Free PMC Article
  5. Gene regulatory networks controlling hematopoietic progenitor niche cell production and differentiation in the Drosophila lymph gland. Tokusumi Y, et al. PLoS One, 2012. PMID 22911822, Free PMC Article

See all (33) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in tRNA transcription by RNA polymerase III IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in transcription by RNA polymerase III IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
part_of RNA polymerase III complex IBA
Inferred from Biological aspect of Ancestor
more info
  
part_of RNA polymerase III complex IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
RNA polymerase III subunit D
Names
CG5147-PA
Polr3D-PA
RNA polymerase III subunit C53

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_037436.4 Reference assembly

    Range
    18107848..18109574 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_140771.3 → NP_649028.3  RNA polymerase III subunit D [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_649028.3

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q8SYM9, Q95S56, Q9VVN3
    Related
    FBpp0074902
    Conserved Domains (1) summary
    pfam05132
    Location:272 → 395
    RNA_pol_Rpc4; RNA polymerase III RPC4
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q8SYM9 Q8SYM9
Q95S56 Q95S56

Gene LinkOut

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