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LINC01002 long intergenic non-protein coding RNA 1002 [ Homo sapiens (human) ]

Gene ID: 399844, updated on 23-Nov-2021

Summary

Official Symbol
LINC01002provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 1002provided by HGNC
Primary source
HGNC:HGNC:38538
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Broad expression in testis (RPKM 21.8), bone marrow (RPKM 15.1) and 19 other tissues See more
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Genomic context

See LINC01002 in Genome Data Viewer
Location:
19p13.3
Exon count:
3
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 19 NC_000019.10 (197016..202209, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 19 NC_000019.9 (197016..202209, complement)

Chromosome 19 - NC_000019.10Genomic Context describing neighboring genes Neighboring gene septin 14 pseudogene 19 Neighboring gene capicua transcriptional repressor pseudogene 19 Neighboring gene uncharacterized LOC101928344 Neighboring gene RNA, U6 small nuclear 1076, pseudogene Neighboring gene general transcription factor IIi pseudogene 19

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_028324.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC010507, AC092299

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000019.10 Reference GRCh38.p13 Primary Assembly

    Range
    197016..202209 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001004321.2: Suppressed sequence

    Description
    NM_001004321.2: This RefSeq was permanently suppressed because currently there is insufficient support for the transcript and the protein.
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