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C10orf88B C10orf88B (pseudogene) [ Homo sapiens (human) ]

Gene ID: 399815, updated on 25-Jan-2022

Summary

Official Symbol
C10orf88Bprovided by HGNC
Official Full Name
C10orf88B (pseudogene)provided by HGNC
Primary source
HGNC:HGNC:44080
See related
Ensembl:ENSG00000255624 AllianceGenome:HGNC:44080
Gene type
pseudo
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Biased expression in testis (RPKM 1.7), lymph node (RPKM 0.6) and 9 other tissues See more
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Genomic context

See C10orf88B in Genome Data Viewer
Location:
10q26.13
Exon count:
6
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 10 NC_000010.11 (122879633..122898714)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 10 NC_000010.10 (124639149..124658230)

Chromosome 10 - NC_000010.11Genomic Context describing neighboring genes Neighboring gene FAM24B-CUZD1 readthrough Neighboring gene CUB and zona pellucida like domains 1 Neighboring gene Sharpr-MPRA regulatory region 14360 Neighboring gene family with sequence similarity 24 member B Neighboring gene Sharpr-MPRA regulatory region 13232 Neighboring gene family with sequence similarity 24 member A Neighboring gene chromosome 10 open reading frame 88

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_027282.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC073585, AK300776, DA816061, DY654994
    Related
    ENST00000425266.3

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000010.11 Reference GRCh38.p13 Primary Assembly

    Range
    122879633..122898714
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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