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MBUR_RS05595 DNA ligase [ Methanococcoides burtonii DSM 6242 ]

Gene ID: 3998025, updated on 21-Apr-2017
Gene symbol
MBUR_RS05595
Gene description
DNA ligase
Locus tag
MBUR_RS05595
Gene type
protein coding
Organism
Methanococcoides burtonii DSM 6242 (strain: DSM 6242)
Lineage
Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanococcoides
Old locus tag
Mbur_1088
Sequence:
NC_007955.1 (1166020..1167723)

NC_007955.1Genomic Context describing neighboring genes Neighboring gene amino acid-binding protein Neighboring gene homoserine dehydrogenase Neighboring gene hypothetical protein Neighboring gene hypothetical protein

  • Base excision repair, organism-specific biosystem (from KEGG)
    Base excision repair, organism-specific biosystemBase excision repair (BER) is the predominant DNA damage repair pathway for the processing of small base lesions, derived from oxidation and alkylation damages. BER is normally defined as DNA repair ...
  • Base excision repair, conserved biosystem (from KEGG)
    Base excision repair, conserved biosystemBase excision repair (BER) is the predominant DNA damage repair pathway for the processing of small base lesions, derived from oxidation and alkylation damages. BER is normally defined as DNA repair ...
  • DNA replication, organism-specific biosystem (from KEGG)
    DNA replication, organism-specific biosystemA complex network of interacting proteins and enzymes is required for DNA replication. Generally, DNA replication follows a multistep enzymatic pathway. At the DNA replication fork, a DNA helicase (D...
  • DNA replication, conserved biosystem (from KEGG)
    DNA replication, conserved biosystemA complex network of interacting proteins and enzymes is required for DNA replication. Generally, DNA replication follows a multistep enzymatic pathway. At the DNA replication fork, a DNA helicase (D...
  • Mismatch repair, organism-specific biosystem (from KEGG)
    Mismatch repair, organism-specific biosystemDNA mismatch repair (MMR) is a highly conserved biological pathway that plays a key role in maintaining genomic stability. MMR corrects DNA mismatches generated during DNA replication, thereby preven...
  • Mismatch repair, conserved biosystem (from KEGG)
    Mismatch repair, conserved biosystemDNA mismatch repair (MMR) is a highly conserved biological pathway that plays a key role in maintaining genomic stability. MMR corrects DNA mismatches generated during DNA replication, thereby preven...
  • Nucleotide excision repair, organism-specific biosystem (from KEGG)
    Nucleotide excision repair, organism-specific biosystemNucleotide excision repair (NER) is a mechanism to recognize and repair bulky DNA damage caused by compounds, environmental carcinogens, and exposure to UV-light. In humans hereditary defects in the ...
  • Nucleotide excision repair, conserved biosystem (from KEGG)
    Nucleotide excision repair, conserved biosystemNucleotide excision repair (NER) is a mechanism to recognize and repair bulky DNA damage caused by compounds, environmental carcinogens, and exposure to UV-light. In humans hereditary defects in the ...

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_007955.1 Reference assembly

    Range
    1166020..1167723
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_011499166.1 DNA ligase [Methanococcoides burtonii]

    See identical proteins and their annotated locations for WP_011499166.1

    UniProtKB/Swiss-Prot
    Q12X08
    Conserved Domains (4) summary
    cd07972
    Location:439560
    OBF_DNA_ligase_Arch_LigB; The Oligonucleotide/oligosaccharide binding (OB)-fold domain of archaeal and bacterial ATP-dependent DNA ligases is a DNA-binding module that is part of the catalytic core unit
    cd07901
    Location:234436
    Adenylation_DNA_ligase_Arch_LigB; Adenylation domain of archaeal and bacterial LigB-like DNA ligases
    PRK01109
    Location:3566
    PRK01109; ATP-dependent DNA ligase; Provisional
    pfam04675
    Location:4185
    DNA_ligase_A_N; DNA ligase N terminus
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