Format

Send to:

Choose Destination

rogdi [ Drosophila melanogaster (fruit fly) ]

Gene ID: 39917, updated on 6-Jul-2021

Summary

Official Symbol
rogdiprovided by FlyBase
Primary source
FLYBASE:FBgn0036697
Locus tag
Dmel_CG7725
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CG7725; Dmel\CG7725; Rogdi
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See rogdi in Genome Data Viewer
Location:
73E5-73E5; 3-45 cM
Exon count:
8
Annotation release Status Assembly Chr Location
Release 6.32 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (17049512..17055454)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (17042612..17048554)

Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene PAPS transporter 2 Neighboring gene Troponin C at 73F Neighboring gene POP5 ribonuclease P/MRP subunit Neighboring gene uncharacterized protein Neighboring gene RNA-binding protein 6 Neighboring gene antisense RNA:CR43433

Genomic regions, transcripts, and products

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Homology

  • Homologs of the rogdi gene: The rogdi gene is conserved in human, chimpanzee, Rhesus monkey, dog, cow, mouse, rat, chicken, zebrafish, mosquito, and frog.

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in behavioral response to ethanol IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in gamma-aminobutyric acid secretion, neurotransmission IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in sleep IMP
Inferred from Mutant Phenotype
more info
PubMed 
Component Evidence Code Pubs
part_of RAVE complex IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 

General protein information

Preferred Names
rogdi
Names
CG7725-PA
CG7725-PB
rogdi-PA
rogdi-PB

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_037436.4 Reference assembly

    Range
    17049512..17055454
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_168717.2NP_730244.1  rogdi, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_730244.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9VVE2
    Related
    FBpp0075042, FBtr0075282
    Conserved Domains (1) summary
    pfam10259
    Location:93280
    Rogdi_lz; Rogdi leucine zipper containing protein
  2. NM_140699.3NP_648956.1  rogdi, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_648956.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9VVE2
    Related
    FBpp0075043, FBtr0075283
    Conserved Domains (1) summary
    pfam10259
    Location:18205
    Rogdi_lz; Rogdi leucine zipper containing protein
Support Center