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tube1.L tubulin epsilon 1 L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 398412, updated on 24-Jul-2025
Official Symbol
tube1.L
Official Full Name
tubulin epsilon 1 L homeolog
Primary source
Xenbase:XB-GENE-866193
Locus tag
XELAEV_18027174mg
See related
EnsemblRapid:ENSXLAG00005027688 AllianceGenome:Xenbase:XB-GENE-866193
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
tube1
Summary
Predicted to enable GTP binding activity. Predicted to act upstream of or within microtubule-based process. Predicted to be located in cytoplasm and microtubule. Is expressed in dermal system. Orthologous to human TUBE1 (tubulin epsilon 1). [provided by Alliance of Genome Resources, Apr 2025]
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See tube1.L in Genome Data Viewer
Location:
chromosome: 5L
Exon count:
12
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 5L NC_054379.1 (80069935..80089099)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 5L NC_030732.1 (77856708..77875858)

Chromosome 5L - NC_054379.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121393711 Neighboring gene uncharacterized LOC121393710 Neighboring gene laminin subunit alpha 4 L homeolog Neighboring gene cellular communication network factor 6 L homeolog Neighboring gene FYN proto-oncogene, Src family tyrosine kinase L homeolog

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. A deep proteomics perspective on CRM1-mediated nuclear export and nucleocytoplasmic partitioning. Kırlı K, et al. Elife, 2015 Dec 17. PMID 26673895, Free PMC Article

GeneRIFs: Gene References Into Functions

Products Interactant Other Gene Complex Source Pubs Description

Homology

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
  
enables nucleotide binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within microtubule-based process IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in centrosome IEA
Inferred from Electronic Annotation
more info
  
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
  
located_in cytoskeleton IEA
Inferred from Electronic Annotation
more info
  
located_in microtubule IEA
Inferred from Electronic Annotation
more info
  
Preferred Names
tubulin epsilon 1 L homeolog
Names
epsilon-tubulin
tubulin, epsilon 1

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001088869.1 → NP_001082338.1  tubulin epsilon 1 L homeolog

    See identical proteins and their annotated locations for NP_001082338.1

    Status: PROVISIONAL

    Source sequence(s)
    AF430841
    UniProtKB/TrEMBL
    A0A974CXC4, Q8AXK5
    Related
    ENSXLAP00005082777.1, ENSXLAT00005084415.1
    Conserved Domains (2) summary
    PTZ00387
    Location:1 → 456
    PTZ00387; epsilon tubulin; Provisional
    cd02190
    Location:2 → 455
    epsilon_tubulin; The epsilon-tubulin family

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054379.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    80069935..80089099
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

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