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CRHR1 corticotropin releasing hormone receptor 1 [ Sus scrofa (pig) ]

Gene ID: 397426, updated on 17-Aug-2024

Summary

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Official Symbol
CRHR1provided by VGNC
Official Full Name
corticotropin releasing hormone receptor 1provided by VGNC
Primary source
VGNC:VGNC:98983
See related
Ensembl:ENSSSCG00000017313
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Sus scrofa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
Expression
Restricted expression toward ovary (RPKM 8.0) See more
Orthologs
human mouse all
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Genomic context

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See CRHR1 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
12
Annotation release Status Assembly Chr Location
106 current Sscrofa11.1 (GCF_000003025.6) 12 NC_010454.4 (17251361..17306308, complement)
105 previous assembly Sscrofa10.2 (GCF_000003025.5) 12 NC_010454.3 (17367191..17420472, complement)

Chromosome 12 - NC_010454.4Genomic Context describing neighboring genes Neighboring gene microtubule associated protein tau Neighboring gene uncharacterized LOC102167583 Neighboring gene signal peptide peptidase like 2C Neighboring gene 60S ribosomal protein L13a pseudogene Neighboring gene uncharacterized LOC102165973 Neighboring gene ADP-ribosylation factor 2 Neighboring gene N-ethylmaleimide sensitive factor, vesicle fusing ATPase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Early weaning stress impairs development of mucosal barrier function in the porcine intestine. Smith F, et al. Am J Physiol Gastrointest Liver Physiol, 2010 Mar. PMID 19926814, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables G protein-coupled peptide receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables corticotrophin-releasing factor receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables corticotropin-releasing hormone binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables corticotropin-releasing hormone receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in adenylate cyclase-activating G protein-coupled receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell surface receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in neuron projection IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
corticotropin-releasing factor receptor 1
Names
corticotropin releasing hormone receptor type I

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001144110.1 → NP_001137582.1  corticotropin-releasing factor receptor 1 precursor

    See identical proteins and their annotated locations for NP_001137582.1

    Status: PROVISIONAL

    Source sequence(s)
    EU350073
    UniProtKB/TrEMBL
    A0A5G2QX53, A0A8D1D619, B8Q4Z8
    Related
    ENSSSCP00000018346.2, ENSSSCT00000018849.5
    Conserved Domains (2) summary
    smart00008
    Location:41 → 111
    HormR; Domain present in hormone receptors
    cd15445
    Location:116 → 380
    7tmB1_CRF-R1; corticotropin-releasing factor receptor 1, member of the class B family of seven-transmembrane G protein-coupled receptors

RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sscrofa11.1 Primary Assembly

Genomic

  1. NC_010454.4 Reference Sscrofa11.1 Primary Assembly

    Range
    17251361..17306308 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021066246.1 → XP_020921905.1  corticotropin-releasing factor receptor 1 isoform X1

    UniProtKB/TrEMBL
    A0A5G2QX53, A0A8D1D619
    Conserved Domains (2) summary
    smart00008
    Location:40 → 111
    HormR; Domain present in hormone receptors
    cd15445
    Location:116 → 449
    7tmB1_CRF-R1; corticotropin-releasing factor receptor 1, member of the class B family of seven-transmembrane G protein-coupled receptors
Nucleotide Protein
Heading Accession and Version

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