CHGB chromogranin B [Sus scrofa (pig)] - Gene

Summary

Official Symbol: CHGBprovided by VGNC
Official Full Name: chromogranin Bprovided by VGNC
Primary source: VGNC:VGNC:95908
See related: Ensembl:ENSSSCG00000039779
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Sus scrofa
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
Also known as: CGB
Expression: Biased expression in mixtures (RPKM 8.2) and ovary (RPKM 2.0) See more
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 17

Exon count:: 5

Annotation release	Status	Assembly	Chr	Location
106	current	Sscrofa11.1 (GCF_000003025.6)	17	NC_010459.5 (14747282..14761995)
105	previous assembly	Sscrofa10.2 (GCF_000003025.5)	17	NC_010459.4 (15800576..15805992) , (15866036..15870070)

Chromosome 17 - NC_010459.5 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Transcriptome data used for gene annotation
Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
BioProject: PRJNA311523
Publication: PMID 27646534
Analysis date: Thu Dec 14 17:10:49 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

expression and localization of chromogranin A (CgA), chromogranin B (CgB), synaptophysin, and insulin were ultrastructurally studied with the immunogold technique in porcine and human pancreatic islet neuroendocrine cells
Title: Cellular expression and specific intragranular localization of chromogranin A, chromogranin B, and synaptophysin during ontogeny of pancreatic islet cells: an ultrastructural study.

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General gene information

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Markers

MARC_33165-33166:1050500783:1 (e-PCR)
- UniSTS:471499

MARC_33167-33168:1050501167:1 (e-PCR)
- UniSTS:471500

Gene Ontology Provided by RefSeq

Component	Evidence Code	Pubs
located_in extracellular space	IEA Inferred from Electronic Annotation more info	PubMed
located_in secretory granule	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: secretogranin-1

Names: chromogranin B (secretogranin 1); secretogranin I; sgI

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.