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PCSK1 proprotein convertase subtilisin/kexin type 1 [ Sus scrofa (pig) ]

Gene ID: 397103, updated on 27-Jan-2018
Gene symbol
PCSK1
Gene description
proprotein convertase subtilisin/kexin type 1
See related
Ensembl:ENSSSCG00000014169
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Sus scrofa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Cetartiodactyla; Suina; Suidae; Sus
Also known as
PC1/3
Annotation information
Annotation category: partial on reference assembly
Expression
Restricted expression toward mixtures (RPKM 1.2) See more
Orthologs
Location:
2q
Exon count:
14
Annotation release Status Assembly Chr Location
106 current Sscrofa11.1 (GCF_000003025.6) 2 NC_010444.4 (103004794..103050707, complement)
105 previous assembly Sscrofa10.2 (GCF_000003025.5) Unplaced Scaffold NW_003540493.1 (69923..112778)

Chromosome 2 - NC_010444.4Genomic Context describing neighboring genes Neighboring gene glutaredoxin Neighboring gene uncharacterized LOC106508433 Neighboring gene elongation factor for RNA polymerase II 2 Neighboring gene uncharacterized LOC110259691 Neighboring gene calpastatin Neighboring gene endoplasmic reticulum aminopeptidase 1

  • Project title: Transcriptome data used for gene annotation
  • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
  • BioProject: PRJNA311523
  • Publication: PMID 27646534
  • Analysis date: Thu Dec 14 17:10:49 2017

Related articles in PubMed

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Preferred Names
neuroendocrine convertase 1
Names
prohormone convertase
NP_999203.1

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_214038.1NP_999203.1  neuroendocrine convertase 1 precursor

    See identical proteins and their annotated locations for NP_999203.1

    Status: PROVISIONAL

    Source sequence(s)
    U20545
    UniProtKB/TrEMBL
    Q28959
    Related
    ENSSSCP00000015068.3, ENSSSCT00000015478.3
    Conserved Domains (5) summary
    cd04059
    Location:121415
    Peptidases_S8_Protein_convertases_Kexins_Furin-like; Peptidase S8 family domain in Protein convertases
    pfam00082
    Location:158432
    Peptidase_S8; Subtilase family
    pfam01483
    Location:504591
    P_proprotein; Proprotein convertase P-domain
    pfam12177
    Location:715751
    Proho_convert; Prohormone convertase enzyme
    pfam16470
    Location:34110
    S8_pro-domain; Peptidase S8 pro-domain

RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sscrofa11.1 Primary Assembly

Genomic

  1. NC_010444.4 Reference Sscrofa11.1 Primary Assembly

    Range
    103004794..103050707 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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