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Ugt1a3 UDP glycosyltransferase 1 family, polypeptide A3 [ Rattus norvegicus (Norway rat) ]

Gene ID: 396551, updated on 30-Sep-2021

Summary

Official Symbol
Ugt1a3provided by RGD
Official Full Name
UDP glycosyltransferase 1 family, polypeptide A3provided by RGD
Primary source
RGD:1549728
See related
EnsemblRapid:ENSRNOG00000018740
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
Ugt1; Ugt1a4; UDPGT 1-3
Expression
Biased expression in Liver (RPKM 2039.7), Kidney (RPKM 843.4) and 2 other tissues See more
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Genomic context

See Ugt1a3 in Genome Data Viewer
Location:
9q35
Exon count:
5
Annotation release Status Assembly Chr Location
108 current mRatBN7.2 (GCF_015227675.2) 9 NC_051344.1 (88780328..88808465)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 9 NC_005108.4 (95274707..95302822)

Chromosome 9 - NC_051344.1Genomic Context describing neighboring genes Neighboring gene UDP glucuronosyltransferase family 1 member A9 Neighboring gene UDP glucuronosyltransferase family 1 member A8 Neighboring gene uncharacterized LOC108351970 Neighboring gene UDP glucuronosyltransferase 1 family, polypeptide A7C Neighboring gene UDP glucuronosyltransferase family 1 member A6 Neighboring gene UDP glucuronosyltransferase family 1 member A5 Neighboring gene UDP glycosyltransferase 1 family, polypeptide A4, pseudogene Neighboring gene UDP glucuronosyltransferase 1 family, polypeptide A2 Neighboring gene DnaJ heat shock protein family (Hsp40) member B3 Neighboring gene UDP glucuronosyltransferase family 1 member A1 Neighboring gene maestro heat-like repeat family member 2A Neighboring gene Holliday junction recognition protein Neighboring gene similar to peptidylprolyl isomerase D

Genomic regions, transcripts, and products

Expression

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Pathways from PubChem

General gene information

Markers

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables glucuronosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
enables glucuronosyltransferase activity ISS
Inferred from Sequence or Structural Similarity
more info
 
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in animal organ regeneration IEP
Inferred from Expression Pattern
more info
PubMed 
involved_in bile acid secretion ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in cellular glucuronidation ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in estrogen metabolic process ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in flavonoid glucuronidation IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in vitamin D3 metabolic process ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in xenobiotic glucuronidation IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in xenobiotic glucuronidation ISS
Inferred from Sequence or Structural Similarity
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 
located_in integral component of membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
UDP-glucuronosyltransferase 1A3
Names
B3
UDP glycosyltransferase 1 family polypeptide A4
UDP-glucuronosyltransferase 1-3
UDPGT
UGT1*3
UGT1-03
UGT1.3
NP_958827.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_201424.2NP_958827.1  UDP-glucuronosyltransferase 1A3 precursor

    See identical proteins and their annotated locations for NP_958827.1

    Status: VALIDATED

    Source sequence(s)
    AC120922, AY435131
    UniProtKB/TrEMBL
    Q6T5F1
    Related
    ENSRNOP00000046507.3, ENSRNOT00000045163.7
    Conserved Domains (2) summary
    PHA03392
    Location:228505
    egt; ecdysteroid UDP-glucosyltransferase; Provisional
    pfam00201
    Location:26522
    UDPGT; UDP-glucoronosyl and UDP-glucosyl transferase

RefSeqs of Annotated Genomes: Rattus norvegicus Annotation Release 108 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mRatBN7.2 Primary Assembly

Genomic

  1. NC_051344.1 Reference mRatBN7.2 Primary Assembly

    Range
    88780328..88808465
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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