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EFNA5 ephrin A5 [ Gallus gallus (chicken) ]

Gene ID: 396100, updated on 10-Oct-2024

Summary

Symbol
EFNA5provided by CGNC
Full Name
ephrin A5provided by CGNC
Primary source
CGNC:49648
See related
Ensembl:ENSGALG00010010266
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as
RAGS
Orthologs
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Genomic context

See EFNA5 in Genome Data Viewer
Location:
chromosome: Z
Exon count:
6
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) Z NC_052572.1 (48721421..48928978)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) Z NC_059536.1 (48721421..48928978)

Chromosome Z - NC_052572.1Genomic Context describing neighboring genes Neighboring gene F-box and leucine rich repeat protein 17 Neighboring gene uncharacterized LOC121108297 Neighboring gene uncharacterized LOC121108476 Neighboring gene uncharacterized LOC121108343 Neighboring gene uncharacterized LOC101749911 Neighboring gene uncharacterized LOC107052334

Genomic regions, transcripts, and products

Bibliography

General gene information

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ephrin receptor binding IEA
Inferred from Electronic Annotation
more info
PubMed 
Process Evidence Code Pubs
involved_in axon guidance IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in ephrin receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in regulation of actin cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in regulation of cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
located_in external side of plasma membrane IEA
Inferred from Electronic Annotation
more info
PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
PubMed 

General protein information

Preferred Names
ephrin-A5
Names
EPH-related receptor tyrosine kinase ligand 7
LERK-7
repulsive axon guidance signal protein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001397572.1NP_001384501.1  ephrin-A5 isoform 2 precursor

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000095
    Conserved Domains (1) summary
    cd10425
    Location:30159
    Ephrin-A_Ectodomain; Ectodomain of Ephrin A
  2. NM_001397573.1NP_001384502.1  ephrin-A5 isoform 3

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000095
    Conserved Domains (1) summary
    cd10425
    Location:7123
    Ephrin-A_Ectodomain; Ectodomain of Ephrin A
  3. NM_001397574.1NP_001384503.1  ephrin-A5 isoform 4

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000095
  4. NM_205184.3NP_990515.2  ephrin-A5 isoform 1 precursor

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000095
    UniProtKB/TrEMBL
    A0A8V0YD65
    Related
    ENSGALP00010013897.1, ENSGALT00010024484.1
    Conserved Domains (1) summary
    cd10425
    Location:30159
    Ephrin-A_Ectodomain; Ectodomain of Ephrin A

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052572.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    48721421..48928978
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_059536.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    48721421..48928978
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)