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TBX19 T-box 19 [ Gallus gallus (chicken) ]

Gene ID: 395793, updated on 10-Oct-2019

Summary

Symbol
TBX19provided by CGNC
Full Name
T-box 19provided by CGNC
Primary source
CGNC:49480
See related
Ensembl:ENSGALG00000015244
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as
TBXT; CH-TBXT
Annotation information
Annotation category: partial on reference assembly
Orthologs

Genomic context

See TBX19 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
8
Annotation release Status Assembly Chr Location
104 current GRCg6a (GCF_000002315.5) 1 NC_006088.5 (85209234..85223485, complement)
103 previous assembly Gallus_gallus-5.0 (GCF_000002315.4) 1 NC_006088.4 (84082889..84097141, complement)
102 previous assembly Gallus_gallus-4.0 (GCF_000002315.3) 1 NC_006088.3 (83487398..83501650, complement)

Chromosome 1 - NC_006088.5Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107054882 Neighboring gene dermatopontin Neighboring gene X-C motif chemokine ligand 1 Neighboring gene SFT2 domain containing 2 Neighboring gene TOR signaling pathway regulator

Genomic regions, transcripts, and products

General gene information

Homology

Gene Ontology Provided by GOA

Function Evidence Code Pubs
DNA-binding transcription activator activity, RNA polymerase II-specific IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
RNA polymerase II activating transcription factor binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
RNA polymerase II regulatory region sequence-specific DNA binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Process Evidence Code Pubs
cell fate specification IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
heart morphogenesis IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
mesoderm formation IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
negative regulation of transcription by RNA polymerase II IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
positive regulation of transcription by RNA polymerase II IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
somitogenesis IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Component Evidence Code Pubs
nuclear chromatin IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
nucleus IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 

General protein information

Preferred Names
T-box transcription factor TBX19
Names
T-box containing protein
T-box-containing protein TBXT

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_204950.1NP_990281.1  T-box transcription factor TBX19

    See identical proteins and their annotated locations for NP_990281.1

    Status: PROVISIONAL

    Source sequence(s)
    U67087
    UniProtKB/Swiss-Prot
    P79778
    Related
    ENSGALP00000024551.3, ENSGALT00000024597.4
    Conserved Domains (1) summary
    smart00425
    Location:39221
    TBOX; Domain first found in the mice T locus (Brachyury) protein

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCg6a Primary Assembly

Genomic

  1. NC_006088.5 Reference GRCg6a Primary Assembly

    Range
    85209234..85223485 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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