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nan nanchung [ Drosophila melanogaster (fruit fly) ]

Gene ID: 39571, updated on 26-Aug-2021

Summary

Official Symbol
nanprovided by FlyBase
Official Full Name
nanchungprovided by FlyBase
Primary source
FLYBASE:FBgn0036414
Locus tag
Dmel_CG5842
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CG5842; CT18317; Dmel\CG5842; DmNan; Iav; Nan; NAN; OCR; TRPV
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Genomic context

See nan in Genome Data Viewer
Location:
70D3-70D3; 3-42 cM
Exon count:
9
Annotation release Status Assembly Chr Location
Release 6.32 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (14186249..14189648, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (14179349..14182748, complement)

Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene long non-coding RNA:CR45887 Neighboring gene Dichaete Neighboring gene nuclear fallout Neighboring gene saturn Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

Bibliography

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables calcium channel activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables calcium channel activity ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
enables cation channel activity ISS
Inferred from Sequence or Structural Similarity
more info
 
enables ion channel activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Component Evidence Code Pubs
part_of cation channel complex ISS
Inferred from Sequence or Structural Similarity
more info
 
is_active_in integral component of plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 

General protein information

Preferred Names
nanchung
Names
CG5842-PA
CG5842-PB
NANCHUNG
nan-PA
nan-PB
transient receptor potential vanilloid

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_037436.4 Reference assembly

    Range
    14186249..14189648 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_140439.3NP_648696.2  nanchung, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_648696.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9VUD5
    Related
    FBpp0088509, FBtr0089524
    Conserved Domains (4) summary
    cd00204
    Location:178329
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam00520
    Location:519727
    Ion_trans; Ion transport protein
    pfam12796
    Location:184311
    Ank_2; Ankyrin repeats (3 copies)
    sd00045
    Location:179229
    ANK; ANK repeat [structural motif]
  2. NM_001274904.1NP_001261833.1  nanchung, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001261833.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    M9PI57
    Related
    FBpp0302810, FBtr0321258
    Conserved Domains (4) summary
    cd00204
    Location:178329
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam00520
    Location:519727
    Ion_trans; Ion transport protein
    pfam12796
    Location:184311
    Ank_2; Ankyrin repeats (3 copies)
    sd00045
    Location:179229
    ANK; ANK repeat [structural motif]
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