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sod1.L superoxide dismutase 1 L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 394274, updated on 8-Apr-2017
Symbol
sod1.L
Full Name
superoxide dismutase 1 L homeolog
Primary source
Xenbase:XB-GENE-6254670
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
als; sod; als1; ipoa; sod1; XSODB; sod1-a; sod1-b
Annotation information
Annotation category: partial on reference assembly
See sod1.L in Genome Data Viewer
Location:
chromosome: 6S
Exon count:
1
Annotation release Status Assembly Chr Location
100 current Xenopus_laevis_v2 (GCF_001663975.1) 6S NC_030735.1 (12731629..12732131, complement)

Chromosome 6S - NC_030735.1Genomic Context describing neighboring genes Neighboring gene disco-interacting protein 2 homolog C-like Neighboring gene La ribonucleoprotein domain family member 4B S homeolog Neighboring gene isopentenyl-diphosphate delta isomerase 1 S homeolog Neighboring gene WD repeat domain 37 S homeolog

Genomic Sequence:
NC_030735.1 Chromosome 6S Reference Xenopus_laevis_v2 Primary Assembly
  • Peroxisome, organism-specific biosystem (from KEGG)
    Peroxisome, organism-specific biosystemPeroxisomes are essential organelles that play a key role in redox signalling and lipid homeostasis. They contribute to many crucial metabolic processes such as fatty acid oxidation, biosynthesis of ...
  • Peroxisome, conserved biosystem (from KEGG)
    Peroxisome, conserved biosystemPeroxisomes are essential organelles that play a key role in redox signalling and lipid homeostasis. They contribute to many crucial metabolic processes such as fatty acid oxidation, biosynthesis of ...
Preferred Names
superoxide dismutase [Cu-Zn] B
Names
Cu,Zn superoxide dismutase
superoxide dismutase 1, soluble L homeolog

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001087464.1NP_001080933.1  superoxide dismutase [Cu-Zn] B

    See identical proteins and their annotated locations for NP_001080933.1

    Status: PROVISIONAL

    Source sequence(s)
    BC070696
    UniProtKB/Swiss-Prot
    P15107
    UniProtKB/TrEMBL
    A0A1L8HCL3
    Conserved Domains (1) summary
    cd00305
    Location:2144
    Cu-Zn_Superoxide_Dismutase; Copper/zinc superoxide dismutase (SOD). superoxide dismutases catalyse the conversion of superoxide radicals to molecular oxygen. Three evolutionarily distinct families of SODs are known, of which the copper/zinc-binding family is one. Defects in the ...

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v2 Primary Assembly

Genomic

  1. NC_030735.1 Reference Xenopus_laevis_v2 Primary Assembly

    Range
    12731629..12732131 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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