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cct8 chaperonin containing TCP1, subunit 8 (theta) [ Danio rerio (zebrafish) ]

Gene ID: 394037, updated on 1-Aug-2018

Summary

Official Symbol
cct8provided by ZNC
Official Full Name
chaperonin containing TCP1, subunit 8 (theta)provided by ZNC
Primary source
ZFIN:ZDB-GENE-040426-876
See related
Ensembl:ENSDARG00000008243 Vega:OTTDARG00000027548
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Danio
Also known as
fa22h09; zgc:56059; wu:fa22h09
Orthologs

Genomic context

See cct8 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
16
Annotation release Status Assembly Chr Location
106 current GRCz11 (GCF_000002035.6) 10 NC_007121.7 (25329582..25342989, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 10 NC_007121.6 (25367309..25383225, complement)

Chromosome 10 - NC_007121.7Genomic Context describing neighboring genes Neighboring gene RAB38b, member of RAS oncogene family Neighboring gene transmembrane protein 135 Neighboring gene suppressor of cytokine signaling 5a Neighboring gene uncharacterized LOC101886714 Neighboring gene map3k7 C-terminal like Neighboring gene BTB and CNC homology 1, basic leucine zipper transcription factor 1 b

Genomic regions, transcripts, and products

Pathways from BioSystems

General gene information

Markers

Homology

Clone Names

  • MGC56059

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
ATP binding IEA
Inferred from Electronic Annotation
more info
 
nucleotide binding IEA
Inferred from Electronic Annotation
more info
 
unfolded protein binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
behavioral response to nicotine IMP
Inferred from Mutant Phenotype
more info
PubMed 
protein folding IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
chaperonin-containing T-complex IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
cytoplasm IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
T-complex protein 1 subunit theta
Names
bdav
bette davis

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_201062.1NP_957356.1  T-complex protein 1 subunit theta

    See identical proteins and their annotated locations for NP_957356.1

    Status: PROVISIONAL

    Source sequence(s)
    BC050492
    UniProtKB/TrEMBL
    Q7ZU96
    Related
    ENSDARP00000003468.5, OTTDARP00000029747, ENSDART00000009477.6, OTTDART00000037103
    Conserved Domains (2) summary
    TIGR02346
    Location:10539
    chap_CCT_theta; T-complex protein 1, theta subunit
    pfam00118
    Location:39528
    Cpn60_TCP1; TCP-1/cpn60 chaperonin family

RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007121.7 Reference GRCz11 Primary Assembly

    Range
    25329582..25342989 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005155366.3XP_005155423.1  T-complex protein 1 subunit theta isoform X1

    UniProtKB/TrEMBL
    A0A0R4IJT8
    Related
    ENSDARP00000135440.1, ENSDART00000166348.2
    Conserved Domains (2) summary
    TIGR02346
    Location:10539
    chap_CCT_theta; T-complex protein 1, theta subunit
    pfam00118
    Location:39528
    Cpn60_TCP1; TCP-1/cpn60 chaperonin family
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