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alpl alkaline phosphatase, liver/bone/kidney [ Danio rerio (zebrafish) ]

Gene ID: 393982, updated on 20-May-2018
Official Symbol
alplprovided by ZNC
Official Full Name
alkaline phosphatase, liver/bone/kidneyprovided by ZNC
Primary source
ZFIN:ZDB-GENE-040420-1
See related
Ensembl:ENSDARG00000015546 Vega:OTTDARG00000020427
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Danio
Also known as
alp; Akp2; zgc:56672
Orthologs
See alpl in Genome Data Viewer
Location:
chromosome: 11
Exon count:
14
Annotation release Status Assembly Chr Location
106 current GRCz11 (GCF_000002035.6) 11 NC_007122.7 (27968735..28013407)
105 previous assembly GRCz10 (GCF_000002035.5) 11 NC_007122.6 (27721602..27766233)

Chromosome 11 - NC_007122.7Genomic Context describing neighboring genes Neighboring gene eukaryotic translation initiation factor 4 gamma, 3a Neighboring gene endothelin converting enzyme 1 Neighboring gene guanylin-like Neighboring gene guanylate cyclase activator 2B (uroguanylin)

Clone Names

  • MGC56672

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
alkaline phosphatase activity IEA
Inferred from Electronic Annotation
more info
 
catalytic activity IEA
Inferred from Electronic Annotation
more info
 
hydrolase activity IEA
Inferred from Electronic Annotation
more info
 
phosphatase activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
metabolic process IEA
Inferred from Electronic Annotation
more info
 
response to mechanical stimulus IDA
Inferred from Direct Assay
more info
PubMed 
Component Evidence Code Pubs
integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
membrane IEA
Inferred from Electronic Annotation
more info
 
Preferred Names
alkaline phosphatase, tissue-nonspecific isozyme
Names
tissue-nonspecific alkaline phosphatase
NP_957301.2
XP_005169330.1
XP_021335242.1

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_201007.2NP_957301.2  alkaline phosphatase, tissue-nonspecific isozyme

    Status: VALIDATED

    Source sequence(s)
    BX248318
    UniProtKB/TrEMBL
    F1Q5B5
    Related
    ENSDARP00000117214.1, OTTDARP00000021000, ENSDART00000146461.3, OTTDART00000025539
    Conserved Domains (1) summary
    pfam00245
    Location:88526
    Alk_phosphatase; Alkaline phosphatase

RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007122.7 Reference GRCz11 Primary Assembly

    Range
    27968735..28013407
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005169273.4XP_005169330.1  alkaline phosphatase, tissue-nonspecific isozyme isoform X2

    UniProtKB/TrEMBL
    E7F9U9
    Conserved Domains (1) summary
    pfam00245
    Location:54492
    Alk_phosphatase; Alkaline phosphatase
  2. XM_021479567.1XP_021335242.1  alkaline phosphatase, tissue-nonspecific isozyme isoform X1

    Conserved Domains (1) summary
    pfam00245
    Location:81519
    Alk_phosphatase; Alkaline phosphatase
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