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ndufb2 NADH:ubiquinone oxidoreductase subunit B2 [ Danio rerio (zebrafish) ]

Gene ID: 393764, updated on 17-Nov-2020

Summary

Official Symbol
ndufb2provided by ZNC
Official Full Name
NADH:ubiquinone oxidoreductase subunit B2provided by ZNC
Primary source
ZFIN:ZDB-GENE-040426-1762
See related
Ensembl:ENSDARG00000045490
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
zgc:73329; wu:fb78c03
Orthologs

Genomic context

See ndufb2 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
3
Annotation release Status Assembly Chr Location
106 current GRCz11 (GCF_000002035.6) 4 NC_007115.7 (22480148..22482900)
105 previous assembly GRCz10 (GCF_000002035.5) 4 NC_007115.6 (22759173..22761925)
103 previous assembly Zv9 (GCF_000002035.4) 4 NC_007115.5 (21415838..21418590)

Chromosome 4 - NC_007115.7Genomic Context describing neighboring genes Neighboring gene origin recognition complex, subunit 5 Neighboring gene LHFPL tetraspan subfamily member 3 Neighboring gene lysine (K)-specific methyltransferase 2E Neighboring gene lysine (K)-specific demethylase 7Aa Neighboring gene sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C

Genomic regions, transcripts, and products

Pathways from PubChem

General gene information

Markers

Homology

Clone Names

  • MGC73329

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
oxidation-reduction process IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
membrane IEA
Inferred from Electronic Annotation
more info
 
mitochondrial inner membrane IEA
Inferred from Electronic Annotation
more info
 
mitochondrial respiratory chain complex I IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
mitochondrial respiratory chain complex I IEA
Inferred from Electronic Annotation
more info
 
mitochondrion IEA
Inferred from Electronic Annotation
more info
 
respirasome IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2, mitochondrial
Names
NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2
NP_001161298.1
NP_957085.1

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001167826.1NP_001161298.1  NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2, mitochondrial

    See identical proteins and their annotated locations for NP_001161298.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longer transcript. Variants 1 and 2 encode the same protein.
    Source sequence(s)
    BX537168, CB357970
    UniProtKB/TrEMBL
    Q6PBN0
    Related
    ENSDARP00000066903.3, ENSDART00000066904.4
    Conserved Domains (1) summary
    pfam14813
    Location:2996
    NADH_B2; NADH dehydrogenase 1 beta subcomplex subunit 2
  2. NM_200791.2NP_957085.1  NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2, mitochondrial

    See identical proteins and their annotated locations for NP_957085.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) differs in the 3' UTR compared to variant 1. Variants 1 and 2 encode the same protein.
    Source sequence(s)
    BC059649, BX537168
    UniProtKB/TrEMBL
    Q6PBN0
    Related
    ENSDARP00000115006.1, ENSDART00000146272.3
    Conserved Domains (1) summary
    pfam14813
    Location:2996
    NADH_B2; NADH dehydrogenase 1 beta subcomplex subunit 2

RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007115.7 Reference GRCz11 Primary Assembly

    Range
    22480148..22482900
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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