Format

Send to:

Choose Destination

tuba8l2 tubulin, alpha 8 like 2 [ Danio rerio (zebrafish) ]

Gene ID: 393664, updated on 17-Nov-2020

Summary

Official Symbol
tuba8l2provided by ZNC
Official Full Name
tubulin, alpha 8 like 2provided by ZNC
Primary source
ZFIN:ZDB-GENE-040426-1646
See related
Ensembl:ENSDARG00000031164
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
zgc:73046; zgc:77601
Orthologs

Genomic context

See tuba8l2 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
4
Annotation release Status Assembly Chr Location
106 current GRCz11 (GCF_000002035.6) 1 NC_007112.7 (5402484..5419116)
105 previous assembly GRCz10 (GCF_000002035.5) 1 NC_007112.6 (4704679..4721311)
103 previous assembly Zv9 (GCF_000002035.4) 1 NC_007112.5 (4291638..4308270)

Chromosome 1 - NC_007112.7Genomic Context describing neighboring genes Neighboring gene sprouty RTK signaling antagonist 2 Neighboring gene Nedd4 family interacting protein 2 Neighboring gene serine/threonine kinase 16 Neighboring gene motor neuron and pancreas homeobox 2b

Genomic regions, transcripts, and products

Pathways from PubChem

General gene information

Markers

Homology

Clone Names

  • MGC73046

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
GTP binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
GTP binding IEA
Inferred from Electronic Annotation
more info
 
GTPase activity IEA
Inferred from Electronic Annotation
more info
 
nucleotide binding IEA
Inferred from Electronic Annotation
more info
 
structural constituent of cytoskeleton IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
structural constituent of cytoskeleton IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
microtubule cytoskeleton organization IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
microtubule-based process IEA
Inferred from Electronic Annotation
more info
 
mitotic cell cycle IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Component Evidence Code Pubs
cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
cytoplasm IEA
Inferred from Electronic Annotation
more info
 
cytoskeleton IEA
Inferred from Electronic Annotation
more info
 
microtubule IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
microtubule IEA
Inferred from Electronic Annotation
more info
 

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_200691.1NP_956985.1  tubulin, alpha 8 like 2

    See identical proteins and their annotated locations for NP_956985.1

    Status: PROVISIONAL

    Source sequence(s)
    BC059428
    UniProtKB/TrEMBL
    Q6PC95
    Related
    ENSDARP00000040203.5, ENSDART00000040204.6
    Conserved Domains (1) summary
    PTZ00335
    Location:1439
    PTZ00335; tubulin alpha chain; Provisional

RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007112.7 Reference GRCz11 Primary Assembly

    Range
    5402484..5419116
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Support Center