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pemt phosphatidylethanolamine N-methyltransferase [ Danio rerio (zebrafish) ]

Gene ID: 393127, updated on 1-Aug-2018

Summary

Official Symbol
pemtprovided by ZNC
Official Full Name
phosphatidylethanolamine N-methyltransferaseprovided by ZNC
Primary source
ZFIN:ZDB-GENE-040426-719
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Danio
Also known as
zgc:55479
Annotation information
Annotation category: partial on reference assembly
Orthologs

Genomic context

See pemt in Genome Data Viewer
Location:
chromosome: 12
Exon count:
7
Annotation release Status Assembly Chr Location
106 current GRCz11 (GCF_000002035.6) 12 NC_007123.7 (1286531..1388444)
105 previous assembly GRCz10 (GCF_000002035.5) 12 NC_007123.6 (1286973..1360126)

Chromosome 12 - NC_007123.7Genomic Context describing neighboring genes Neighboring gene lipase maturation factor 1 Neighboring gene RAB26, member RAS oncogene family Neighboring gene ectonucleotide pyrophosphatase/phosphodiesterase family member 2-like Neighboring gene peroxisomal N(1)-acetyl-spermine/spermidine oxidase-like Neighboring gene ras association domain-containing protein 4-like Neighboring gene uncharacterized LOC100535225 Neighboring gene uncharacterized LOC795264 Neighboring gene si:ch73-105m5.1 Neighboring gene RAS, dexamethasone-induced 1

Genomic regions, transcripts, and products

Pathways from BioSystems

General gene information

Markers

Homology

Clone Names

  • MGC55479

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
S-adenosylmethionine-dependent methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
phosphatidyl-N-dimethylethanolamine N-methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
phosphatidyl-N-methylethanolamine N-methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
phosphatidylethanolamine N-methyltransferase activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
transferase activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
lipid metabolic process IEA
Inferred from Electronic Annotation
more info
 
methylation IEA
Inferred from Electronic Annotation
more info
 
phosphatidylcholine biosynthetic process IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
phosphatidylcholine biosynthetic process IEA
Inferred from Electronic Annotation
more info
 
phospholipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 
endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 
integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
membrane IEA
Inferred from Electronic Annotation
more info
 
mitochondrial membrane IEA
Inferred from Electronic Annotation
more info
 
mitochondrion IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
phosphatidylethanolamine N-methyltransferase
NP_956452.1

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_200158.1NP_956452.1  phosphatidylethanolamine N-methyltransferase

    See identical proteins and their annotated locations for NP_956452.1

    Status: PROVISIONAL

    Source sequence(s)
    BC045355
    UniProtKB/TrEMBL
    Q7ZVZ2
    Conserved Domains (1) summary
    pfam04191
    Location:121223
    PEMT; Phospholipid methyltransferase

RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007123.7 Reference GRCz11 Primary Assembly

    Range
    1286531..1388444
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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