Format

Send to:

Choose Destination

NCBP2L nuclear cap binding protein subunit 2 like [ Homo sapiens (human) ]

Gene ID: 392517, updated on 5-Jan-2022

Summary

Official Symbol
NCBP2Lprovided by HGNC
Official Full Name
nuclear cap binding protein subunit 2 likeprovided by HGNC
Primary source
HGNC:HGNC:31795
See related
Ensembl:ENSG00000170935
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
dJ820B18.1
Summary
Predicted to enable RNA cap binding activity. Predicted to be involved in mRNA splicing, via spliceosome. Predicted to be part of nuclear cap binding activity complex. [provided by Alliance of Genome Resources, Nov 2021]
Orthologs
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See NCBP2L in Genome Data Viewer
Location:
Xq22.3
Exon count:
2
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) X NC_000023.11 (107777733..107795829)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) X NC_000023.10 (107020963..107039059)

Chromosome X - NC_000023.11Genomic Context describing neighboring genes Neighboring gene Sharpr-MPRA regulatory region 15331 Neighboring gene TSC22 domain family member 3 Neighboring gene midline 2 Neighboring gene uncharacterized LOC101928335 Neighboring gene TMEM230 pseudogene 1

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General gene information

Homology

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables RNA cap binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Process Evidence Code Pubs
involved_in mRNA cis splicing, via spliceosome IEA
Inferred from Electronic Annotation
more info
 
involved_in mRNA splicing, via spliceosome IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Component Evidence Code Pubs
part_of nuclear cap binding complex IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 

General protein information

Preferred Names
nuclear cap-binding protein subunit 2-like

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001348372.2NP_001335301.1  nuclear cap-binding protein subunit 2-like

    Status: VALIDATED

    Source sequence(s)
    AI209084, AL109946
    Consensus CDS
    CCDS87770.1
    UniProtKB/Swiss-Prot
    A6PVI3
    Related
    ENSP00000476955.1, ENST00000509000.3
    Conserved Domains (1) summary
    cd12240
    Location:44117
    RRM_NCBP2; RNA recognition motif found in nuclear cap-binding protein subunit 2 (CBP20) and similar proteins

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000023.11 Reference GRCh38.p13 Primary Assembly

    Range
    107777733..107795829
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NG_011409.1: Suppressed sequence

    Description
    NG_011409.1: This RefSeq was removed because it is now thought that this gene does encode a protein.
Support Center