U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

USP17L6P ubiquitin specific peptidase 17 like family member 6, pseudogene [ Homo sapiens (human) ]

Gene ID: 391622, updated on 13-May-2022

Summary

Official Symbol
USP17L6Pprovided by HGNC
Official Full Name
ubiquitin specific peptidase 17 like family member 6, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:37179
See related
Ensembl:ENSG00000205946 AllianceGenome:HGNC:37179
Gene type
pseudo
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
DUB4; vDUB4; USP17L6
Summary
Enables thiol-dependent deubiquitinase. Involved in protein deubiquitination involved in ubiquitin-dependent protein catabolic process. Located in cytoplasm and nucleus. [provided by Alliance of Genome Resources, Apr 2022]
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See USP17L6P in Genome Data Viewer
Location:
4p16.1
Exon count:
1
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 4 NC_000004.12 (9367874..9369070)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 4 NC_060928.1 (9388397..9389593)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 4 NC_000004.11 (9369600..9370796)

Chromosome 4 - NC_000004.12Genomic Context describing neighboring genes Neighboring gene ubiquitin specific peptidase 17 like family member 9, pseudogene Neighboring gene ubiquitin specific peptidase 17 like family member 30 Neighboring gene zinc finger protein 705A-like Neighboring gene defensin beta 108F (pseudogene)

Genomic regions, transcripts, and products

General gene information

Markers

Other Names

  • chorionic villi deubiquitinating enzyme
  • deubiquitinating enzyme DUB4
  • ubiquitin specific peptidase 17-like 6 (pseudogene)

Gene Ontology Provided by GOA

Function Evidence Code Pubs
NOT enables RNA binding IDA
Inferred from Direct Assay
more info
PubMed 
enables cysteine-type deubiquitinase activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables cysteine-type deubiquitinase activity IDA
Inferred from Direct Assay
more info
PubMed 
enables cysteine-type endopeptidase activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
NOT enables hyaluronic acid binding IDA
Inferred from Direct Assay
more info
PubMed 
Component Evidence Code Pubs
located_in cytoplasm IDA
Inferred from Direct Assay
more info
PubMed 
is_active_in cytosol IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in nucleus IDA
Inferred from Direct Assay
more info
PubMed 

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_027279.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC116655
    Related
    ENST00000382470.1

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000004.12 Reference GRCh38.p14 Primary Assembly

    Range
    9367874..9369070
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060928.1 Alternate T2T-CHM13v2.0

    Range
    9388397..9389593
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_212553.1: Suppressed sequence

    Description
    NM_212553.1: This RefSeq record was removed by NCBI staff. Contact info@ncbi.nlm.nih.gov for further information.