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C1QTNF8 C1q and TNF related 8 [ Homo sapiens (human) ]

Gene ID: 390664, updated on 11-Jun-2021

Summary

Official Symbol
C1QTNF8provided by HGNC
Official Full Name
C1q and TNF related 8provided by HGNC
Primary source
HGNC:HGNC:31374
See related
Ensembl:ENSG00000184471 MIM:614147
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
CTRP8; UNQ5829
Expression
Low expression observed in reference dataset See more
Orthologs
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Genomic context

See C1QTNF8 in Genome Data Viewer
Location:
16p13.3
Exon count:
5
Annotation release Status Assembly Chr Location
109.20210514 current GRCh38.p13 (GCF_000001405.39) 16 NC_000016.10 (1088226..1096306, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 16 NC_000016.9 (1138226..1146244, complement)

Chromosome 16 - NC_000016.10Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107984898 Neighboring gene SSTR5 antisense RNA 1 Neighboring gene somatostatin receptor 5 Neighboring gene uncharacterized LOC107984906 Neighboring gene 16p subtelomeric meiotic recombination hotspot Neighboring gene uncharacterized LOC105371042

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Homology

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Process Evidence Code Pubs
involved_in positive regulation of cell motility IDA
Inferred from Direct Assay
more info
PubMed 
Component Evidence Code Pubs
part_of collagen trimer IEA
Inferred from Electronic Annotation
more info
 
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
complement C1q tumor necrosis factor-related protein 8
Names
C1q and tumor necrosis factor related protein 8
C1q/TNF-related protein 8

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_207419.3NP_997302.2  complement C1q tumor necrosis factor-related protein 8 precursor

    See identical proteins and their annotated locations for NP_997302.2

    Status: VALIDATED

    Source sequence(s)
    AC009041, AL031713
    Consensus CDS
    CCDS32358.1
    UniProtKB/Swiss-Prot
    P60827
    Related
    ENSP00000330426.5, ENST00000328449.6
    Conserved Domains (2) summary
    pfam01391
    Location:69111
    Collagen; Collagen triple helix repeat (20 copies)
    pfam00386
    Location:118246
    C1q; C1q domain

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20210514

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000016.10 Reference GRCh38.p13 Primary Assembly

    Range
    1088226..1096306 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011522483.2XP_011520785.1  complement C1q tumor necrosis factor-related protein 8 isoform X1

    See identical proteins and their annotated locations for XP_011520785.1

    UniProtKB/Swiss-Prot
    P60827
    Conserved Domains (2) summary
    pfam01391
    Location:69111
    Collagen; Collagen triple helix repeat (20 copies)
    pfam00386
    Location:118246
    C1q; C1q domain

RNA

  1. XR_001751901.1 RNA Sequence

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