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UBAP1L ubiquitin associated protein 1 like [ Homo sapiens (human) ]

Gene ID: 390595, updated on 25-Jan-2022

Summary

Official Symbol
UBAP1Lprovided by HGNC
Official Full Name
ubiquitin associated protein 1 likeprovided by HGNC
Primary source
HGNC:HGNC:40028
See related
Ensembl:ENSG00000246922 AllianceGenome:HGNC:40028
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
UBAP-1L
Summary
Predicted to enable ubiquitin binding activity. Predicted to be involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway. Predicted to be part of ESCRT I complex. [provided by Alliance of Genome Resources, Nov 2021]
Expression
Ubiquitous expression in skin (RPKM 1.3), ovary (RPKM 1.1) and 25 other tissues See more
Orthologs
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Genomic context

See UBAP1L in Genome Data Viewer
Location:
15q22.31
Exon count:
6
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 15 NC_000015.10 (65083036..65115200, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 15 NC_000015.9 (65385098..65407538, complement)

Chromosome 15 - NC_000015.10Genomic Context describing neighboring genes Neighboring gene solute carrier family 51 subunit beta Neighboring gene RAS like family 12 Neighboring gene kelch repeat and BTB domain containing 13 Neighboring gene programmed cell death 7 Neighboring gene caseinolytic mitochondrial matrix peptidase chaperone subunit X

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General gene information

Markers

Homology

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables ubiquitin binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Component Evidence Code Pubs
part_of ESCRT I complex IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 

General protein information

Preferred Names
ubiquitin-associated protein 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001163692.2NP_001157164.1  ubiquitin-associated protein 1-like

    See identical proteins and their annotated locations for NP_001157164.1

    Status: VALIDATED

    Source sequence(s)
    AC013553
    Consensus CDS
    CCDS53948.1
    UniProtKB/Swiss-Prot
    F5GYI3
    Related
    ENSP00000454012.1, ENST00000559089.6
    Conserved Domains (1) summary
    cd14316
    Location:341377
    UBA2_UBAP1_like; UBA2 domain found in ubiquitin-associated protein 1 (UBAP-1) and similar proteins

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000015.10 Reference GRCh38.p13 Primary Assembly

    Range
    65083036..65115200 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011521547.3XP_011519849.1  ubiquitin-associated protein 1-like isoform X1

  2. XM_017022172.2XP_016877661.1  ubiquitin-associated protein 1-like isoform X2

RNA

  1. XR_931811.3 RNA Sequence

  2. XR_931812.3 RNA Sequence

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