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ACCSL 1-aminocyclopropane-1-carboxylate synthase homolog (inactive) like [ Homo sapiens (human) ]

Gene ID: 390110, updated on 21-Dec-2019

Summary

Official Symbol
ACCSLprovided by HGNC
Official Full Name
1-aminocyclopropane-1-carboxylate synthase homolog (inactive) likeprovided by HGNC
Primary source
HGNC:HGNC:34391
See related
Ensembl:ENSG00000205126
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
Orthologs

Genomic context

See ACCSL in Genome Data Viewer
Location:
11p11.2
Exon count:
14
Annotation release Status Assembly Chr Location
109.20191205 current GRCh38.p13 (GCF_000001405.39) 11 NC_000011.10 (44047981..44059977)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 11 NC_000011.9 (44069531..44081527)

Chromosome 11 - NC_000011.10Genomic Context describing neighboring genes Neighboring gene alkB homolog 3, alpha-ketoglutaratedependent dioxygenase Neighboring gene ALKBH3 antisense RNA 1 Neighboring gene chromosome 11 open reading frame 96 Neighboring gene 1-aminocyclopropane-1-carboxylate synthase homolog (inactive) Neighboring gene exostosin glycosyltransferase 2

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by GOA

Function Evidence Code Pubs
catalytic activity IEA
Inferred from Electronic Annotation
more info
 
pyridoxal phosphate binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
biosynthetic process IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
probable inactive 1-aminocyclopropane-1-carboxylate synthase-like protein 2
Names
1-aminocyclopropane-1-carboxylate synthase (inactive)-like
1-aminocyclopropane-1-carboxylate synthase homolog(non-functional)-like
1-aminocyclopropane-1-carboxylate synthase-like protein 2
ACC synthase-like protein 2

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001031854.2NP_001027025.2  probable inactive 1-aminocyclopropane-1-carboxylate synthase-like protein 2 isoform 1

    See identical proteins and their annotated locations for NP_001027025.2

    Status: VALIDATED

    Source sequence(s)
    AB231732, AB231733, AB231734, AC134775, DW009984
    Consensus CDS
    CCDS41636.1
    UniProtKB/Swiss-Prot
    Q4AC99
    UniProtKB/TrEMBL
    Q3C1W0
    Related
    ENSP00000368109.1, ENST00000378832.1
    Conserved Domains (2) summary
    cd00609
    Location:171546
    AAT_like; Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine ...
    PLN02607
    Location:150561
    PLN02607; 1-aminocyclopropane-1-carboxylate synthase
  2. NM_001363113.1NP_001350042.1  probable inactive 1-aminocyclopropane-1-carboxylate synthase-like protein 2 isoform 2

    Status: VALIDATED

    Source sequence(s)
    AC134775
    Conserved Domains (1) summary
    cl27741
    Location:17380
    Aminotran_1_2; Aminotransferase class I and II

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20191205

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000011.10 Reference GRCh38.p13 Primary Assembly

    Range
    44047981..44059977
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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