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AJM1 apical junction component 1 homolog [ Homo sapiens (human) ]

Gene ID: 389813, updated on 3-Jun-2018

Summary

Official Symbol
AJM1provided by HGNC
Official Full Name
apical junction component 1 homologprovided by HGNC
Primary source
HGNC:HGNC:37284
See related
Ensembl:ENSG00000232434 Vega:OTTHUMG00000187258
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
ajm-1; C9orf172
Orthologs

Genomic context

See AJM1 in Genome Data Viewer
Location:
9q34.3
Exon count:
3
Annotation release Status Assembly Chr Location
109 current GRCh38.p12 (GCF_000001405.38) 9 NC_000009.12 (136842506..136847345)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 9 NC_000009.11 (139735733..139741884)

Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene RAB, member RAS oncogene family like 6 Neighboring gene nucleolin pseudogene 1 Neighboring gene microRNA 4292 Neighboring gene phosphohistidine phosphatase 1 Neighboring gene MAM domain containing 4

Genomic regions, transcripts, and products

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

General gene information

Homology

Gene Ontology Provided by GOA

Process Evidence Code Pubs
cell-cell junction organization IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
adherens junction IEA
Inferred from Electronic Annotation
more info
 
apical plasma membrane IEA
Inferred from Electronic Annotation
more info
 
cilium IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
apical junction component 1 homolog
Names
uncharacterized protein C9orf172

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001080482.3NP_001073951.2  apical junction component 1 homolog

    See identical proteins and their annotated locations for NP_001073951.2

    Status: VALIDATED

    Source sequence(s)
    AL355987
    Consensus CDS
    CCDS48059.1
    UniProtKB/Swiss-Prot
    C9J069
    Related
    ENSP00000412388.1, OTTHUMP00000275061, ENST00000436881.2
    Conserved Domains (2) summary
    pfam01753
    Location:668710
    zf-MYND; MYND finger
    cl21508
    Location:611660
    Ribosomal_P1_P2_L12p; Ribosomal protein P1, P2, and L12p. Ribosomal proteins P1 and P2 are the eukaryotic proteins that are functionally equivalent to bacterial L7/L12. L12p is the archaeal homolog. Unlike other ribosomal proteins, the archaeal L12p and eukaryotic P1 and P2 ...

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p12 Primary Assembly

Genomic

  1. NC_000009.12 Reference GRCh38.p12 Primary Assembly

    Range
    136842506..136847345
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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