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CCZ1P-OR7E38P CCZ1P-OR7E38P readthrough [ Homo sapiens (human) ]

Gene ID: 389538, updated on 24-Jul-2021

Summary

Gene symbol
CCZ1P-OR7E38P
Gene description
CCZ1P-OR7E38P readthrough
Gene type
pseudo
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Summary
This locus represents naturally-occurring readthrough transcription between two unprocessed unitary pseudogenes, CCZ1P (CCZ1 homolog, vacuolar protein trafficking and biogenesis associated pseudogene) and OR7E38P (olfactory receptor family 7 subfamily E member 38 pseudogene). The individual pseudogene loci are not curated as transcribed regions. Readthrough transcripts contains disrupted open reading frames, relative to functional homologs, and likely do not encode functional proteins. [provided by RefSeq, Jun 2017]
Expression
Ubiquitous expression in fat (RPKM 6.3), lymph node (RPKM 5.3) and 25 other tissues See more
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Genomic context

See CCZ1P-OR7E38P in Genome Data Viewer
Location:
7q21.3
Exon count:
4
Annotation release Status Assembly Chr Location
109.20210514 current GRCh38.p13 (GCF_000001405.39) 7 NC_000007.14 (97966408..97972358, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 7 NC_000007.13 (97595720..97601670, complement)

Chromosome 7 - NC_000007.14Genomic Context describing neighboring genes Neighboring gene CZ1P-ASNS readthrough Neighboring gene microRNA 5692a-1 Neighboring gene microRNA 5692c-2 Neighboring gene olfactory receptor family 7 subfamily E member 38 pseudogene Neighboring gene CCZ1 pseudogene 1 Neighboring gene oncomodulin 2 Neighboring gene RNA, 7SL, cytoplasmic 478, pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_002822.4 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC004967, BC062733, BU729834
  2. NR_148008.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC004967, BQ678047, BU729834

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20210514

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000007.14 Reference GRCh38.p13 Primary Assembly

    Range
    97966408..97972358 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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