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BNIP5 BCL2 interacting protein 5 [ Homo sapiens (human) ]

Gene ID: 389384, updated on 11-Jun-2021

Summary

Official Symbol
BNIP5provided by HGNC
Official Full Name
BCL2 interacting protein 5provided by HGNC
Primary source
HGNC:HGNC:33769
See related
Ensembl:ENSG00000189325
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
C6orf222
Expression
Biased expression in small intestine (RPKM 9.9), duodenum (RPKM 9.6) and 3 other tissues See more
Orthologs
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Genomic context

See BNIP5 in Genome Data Viewer
Location:
6p21.31
Exon count:
13
Annotation release Status Assembly Chr Location
109.20210514 current GRCh38.p13 (GCF_000001405.39) 6 NC_000006.12 (36315757..36337015, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 6 NC_000006.11 (36283538..36304665, complement)

Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene bromodomain and PHD finger containing 3 Neighboring gene uncharacterized LOC105375036 Neighboring gene patatin like phospholipase domain containing 1 Neighboring gene ETS variant transcription factor 7 Neighboring gene ETV7 and PTX1 antisense RNA 1 Neighboring gene peroxisomal testis enriched protein 1 Neighboring gene PXT1 intron CAGE-defined low expression enhancer

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Homology

Clone Names

  • DKFZp779B1540

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 

General protein information

Preferred Names
protein BNIP5
Names
uncharacterized protein C6orf222

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_052656.1 RefSeqGene

    Range
    5128..26255
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001010903.5NP_001010903.3  protein BNIP5

    See identical proteins and their annotated locations for NP_001010903.3

    Status: VALIDATED

    Source sequence(s)
    BC140873, BX648558, Z84484
    Consensus CDS
    CCDS34439.1
    UniProtKB/Swiss-Prot
    P0C671
    Related
    ENSP00000418983.1, ENST00000437635.3
    Conserved Domains (1) summary
    pfam15661
    Location:14652
    CF222; C6orf222, uncharacterized family

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20210514

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000006.12 Reference GRCh38.p13 Primary Assembly

    Range
    36315757..36337015 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011514597.2XP_011512899.1  protein BNIP5 isoform X2

    Conserved Domains (1) summary
    pfam15661
    Location:14651
    CF222; C6orf222, uncharacterized family
  2. XM_011514598.2XP_011512900.1  protein BNIP5 isoform X3

    Conserved Domains (1) summary
    pfam15661
    Location:1404
    CF222; C6orf222, uncharacterized family
  3. XM_011514596.2XP_011512898.1  protein BNIP5 isoform X1

    See identical proteins and their annotated locations for XP_011512898.1

    UniProtKB/Swiss-Prot
    P0C671
    Conserved Domains (1) summary
    pfam15661
    Location:14652
    CF222; C6orf222, uncharacterized family
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