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TEX43 testis expressed 43 [ Homo sapiens (human) ]

Gene ID: 389320, updated on 1-Jun-2020

Summary

Official Symbol
TEX43provided by HGNC
Official Full Name
testis expressed 43provided by HGNC
Primary source
HGNC:HGNC:33767
See related
Ensembl:ENSG00000196900
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
Tseg7; C5orf48
Expression
Restricted expression toward testis (RPKM 4.7) See more
Orthologs

Genomic context

See TEX43 in Genome Data Viewer
Location:
5q23.2
Exon count:
3
Annotation release Status Assembly Chr Location
109.20200522 current GRCh38.p13 (GCF_000001405.39) 5 NC_000005.10 (126631705..126636284)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 5 NC_000005.9 (125967414..125971974)

Chromosome 5 - NC_000005.10Genomic Context describing neighboring genes Neighboring gene phosphorylated adaptor for RNA export Neighboring gene ribosomal protein lateral stalk subunit P1 pseudogene 7 Neighboring gene uncharacterized LOC105379162 Neighboring gene bolA family member 3 pseudogene 3 Neighboring gene heat shock protein family E (Hsp10) member 1 pseudogene 10

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General gene information

Markers

Homology

Clone Names

  • FLJ27505, MGC163367, MGC163369

General protein information

Preferred Names
testis-expressed protein 43
Names
testis specific expressed gene 7
testis-expressed sequence 43 protein

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_207408.3NP_997291.1  testis-expressed protein 43

    See identical proteins and their annotated locations for NP_997291.1

    Status: VALIDATED

    Source sequence(s)
    AC099513, AK131015, BC130495
    Consensus CDS
    CCDS4139.1
    UniProtKB/Swiss-Prot
    Q6ZNM6
    Related
    ENSP00000349669.3, ENST00000357147.4
    Conserved Domains (1) summary
    pfam14983
    Location:3134
    DUF4513; Domain of unknown function (DUF4513)

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000005.10 Reference GRCh38.p13 Primary Assembly

    Range
    126631705..126636284
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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