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PLAC9P1 placenta associated 9 pseudogene 1 [ Homo sapiens (human) ]

Gene ID: 389033, updated on 25-Jan-2022

Summary

Official Symbol
PLAC9P1provided by HGNC
Official Full Name
placenta associated 9 pseudogene 1provided by HGNC
Primary source
HGNC:HGNC:52678
See related
Ensembl:ENSG00000214100 AllianceGenome:HGNC:52678
Gene type
pseudo
RefSeq status
PROVISIONAL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Summary
Predicted to be located in extracellular region. [provided by Alliance of Genome Resources, Nov 2021]
Expression
Biased expression in testis (RPKM 2.0), brain (RPKM 0.4) and 8 other tissues See more
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Genomic context

See PLAC9P1 in Genome Data Viewer
Location:
2q21.1
Exon count:
3
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 2 NC_000002.12 (129922862..129934317, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (130680435..130691890, complement)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene long intergenic non-protein coding RNA 2572 Neighboring gene Sharpr-MPRA regulatory region 12033 Neighboring gene uncharacterized LOC105373616 Neighboring gene long intergenic non-protein coding RNA 1856 Neighboring gene ribosomal protein L22 pseudogene 7 Neighboring gene RAB6C antisense RNA 1 Neighboring gene RAB6C, member RAS oncogene family

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_026740.1 RNA Sequence

    Status: PROVISIONAL

    Source sequence(s)
    AI161103, BF592795
    Related
    ENST00000433290.6

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p13 Primary Assembly

    Range
    129922862..129934317 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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