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C2orf68 chromosome 2 open reading frame 68 [ Homo sapiens (human) ]

Gene ID: 388969, updated on 1-Jun-2020

Summary

Official Symbol
C2orf68provided by HGNC
Official Full Name
chromosome 2 open reading frame 68provided by HGNC
Primary source
HGNC:HGNC:34353
See related
Ensembl:ENSG00000168887 MIM:618519
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
HCRCN81
Expression
Ubiquitous expression in ovary (RPKM 7.0), endometrium (RPKM 6.7) and 25 other tissues See more
Orthologs

Genomic context

See C2orf68 in Genome Data Viewer
Location:
2p11.2
Exon count:
5
Annotation release Status Assembly Chr Location
109.20200522 current GRCh38.p13 (GCF_000001405.39) 2 NC_000002.12 (85605254..85612066, complement)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (85832376..85839179, complement)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene ring finger protein 181 Neighboring gene transmembrane protein 150A Neighboring gene ubiquitin specific peptidase 39 Neighboring gene surfactant protein B Neighboring gene uncharacterized LOC105374842

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • FLJ14112, FLJ35653, MGC131675

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001013649.4NP_001013671.2  UPF0561 protein C2orf68

    See identical proteins and their annotated locations for NP_001013671.2

    Status: VALIDATED

    Source sequence(s)
    AC012454, AC016753, BC111483, BU619982, CN303296
    Consensus CDS
    CCDS42704.1
    UniProtKB/Swiss-Prot
    Q2NKX9
    UniProtKB/TrEMBL
    L7T9J5
    Related
    ENSP00000304410.5, ENST00000306336.6
    Conserved Domains (1) summary
    pfam10573
    Location:5126
    UPF0561; Uncharacterized protein family UPF0561

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p13 Primary Assembly

    Range
    85605254..85612066 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005264305.4XP_005264362.1  UPF0561 protein C2orf68 isoform X1

    See identical proteins and their annotated locations for XP_005264362.1

    Conserved Domains (1) summary
    pfam10573
    Location:579
    UPF0561; Uncharacterized protein family UPF0561
  2. XM_024452879.1XP_024308647.1  UPF0561 protein C2orf68 isoform X1

    Conserved Domains (1) summary
    pfam10573
    Location:579
    UPF0561; Uncharacterized protein family UPF0561

RNA

  1. XR_002959297.1 RNA Sequence

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