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TSPYL6 TSPY like 6 [ Homo sapiens (human) ]

Gene ID: 388951, updated on 13-May-2022

Summary

Official Symbol
TSPYL6provided by HGNC
Official Full Name
TSPY like 6provided by HGNC
Primary source
HGNC:HGNC:14521
See related
Ensembl:ENSG00000178021 AllianceGenome:HGNC:14521
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Summary
Predicted to enable chromatin binding activity and histone binding activity. Predicted to be involved in nucleosome assembly. Predicted to be active in chromatin and nucleus. [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
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Genomic context

See TSPYL6 in Genome Data Viewer
Location:
2p16.2
Exon count:
1
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (54253178..54256229, complement)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (54249424..54252466, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (54480315..54483366, complement)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene acylphosphatase 2 Neighboring gene Sharpr-MPRA regulatory region 3084 Neighboring gene RNA, U7 small nuclear 172 pseudogene Neighboring gene uncharacterized LOC105374610 Neighboring gene chromosome 2 open reading frame 73 Neighboring gene uncharacterized LOC102724072

Genomic regions, transcripts, and products

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • DKFZp434B125

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables chromatin binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables histone binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Process Evidence Code Pubs
involved_in nucleosome assembly IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
is_active_in chromatin IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 

General protein information

Preferred Names
testis-specific Y-encoded-like protein 6
Names
TSPY-like protein 6
testicular tissue protein Li 211

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001003937.3NP_001003937.2  testis-specific Y-encoded-like protein 6

    See identical proteins and their annotated locations for NP_001003937.2

    Status: VALIDATED

    Source sequence(s)
    AK097417, BC068576, DB073493
    Consensus CDS
    CCDS42682.1
    UniProtKB/Swiss-Prot
    Q8N831
    UniProtKB/TrEMBL
    A0A140VJY4
    Related
    ENSP00000417919.2, ENST00000317802.9
    Conserved Domains (1) summary
    cl08298
    Location:205382
    NAP; Nucleosome assembly protein (NAP)

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

    Range
    54253178..54256229 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060926.1 Alternate T2T-CHM13v2.0

    Range
    54249424..54252466 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)