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LINC00207 long intergenic non-protein coding RNA 207 [ Homo sapiens (human) ]

Gene ID: 388910, updated on 13-May-2022

Summary

Official Symbol
LINC00207provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 207provided by HGNC
Primary source
HGNC:HGNC:37255
See related
Ensembl:ENSG00000187012 AllianceGenome:HGNC:37255
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
NCRNA00207
Expression
Low expression observed in reference dataset See more
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Genomic context

See LINC00207 in Genome Data Viewer
Location:
22q13.31
Exon count:
5
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 22 NC_000022.11 (44569340..44572449)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 22 NC_060946.1 (45053126..45056235)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 22 NC_000022.10 (44965220..44968329)

Chromosome 22 - NC_000022.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105373059 Neighboring gene keratin 18 pseudogene 23 Neighboring gene long intergenic non-protein coding RNA 229 Neighboring gene uncharacterized LOC105373060 Neighboring gene acidic nuclear phosphoprotein 32 family member B pseudogene 2

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Phenotypes

EBI GWAS Catalog

Description
The genetic architecture of economic and political preferences.
EBI GWAS Catalog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_028409.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longest transcript.
    Source sequence(s)
    AL022333, BC144508, BU585030
    Related
    ENST00000605505.1
  2. NR_028410.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) lacks an alternate internal exon and uses and alternate splice site, compared to variant 1.
    Source sequence(s)
    AL022333, BC144506, BU585030
    Related
    ENST00000603530.5
  3. NR_028411.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (3) lacks an alternate internal exon, compared to variant 1.
    Source sequence(s)
    AL022333, BU585030
    Related
    ENST00000657777.1

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000022.11 Reference GRCh38.p14 Primary Assembly

    Range
    44569340..44572449
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060946.1 Alternate T2T-CHM13v2.0

    Range
    45053126..45056235
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001012986.1: Suppressed sequence

    Description
    NM_001012986.1: This RefSeq was permanently suppressed because currently there is support for the transcript but not for the protein.