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TMEM82 transmembrane protein 82 [ Homo sapiens (human) ]

Gene ID: 388595, updated on 22-Sep-2022

Summary

Official Symbol
TMEM82provided by HGNC
Official Full Name
transmembrane protein 82provided by HGNC
Primary source
HGNC:HGNC:32350
See related
Ensembl:ENSG00000162460 AllianceGenome:HGNC:32350
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Summary
Predicted to be integral component of membrane. [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in duodenum (RPKM 10.3), small intestine (RPKM 8.5) and 3 other tissues See more
Orthologs
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Genomic context

See TMEM82 in Genome Data Viewer
Location:
1p36.21
Exon count:
6
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (15742499..15747982)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (15187236..15192722)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (16068994..16074477)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene pleckstrin homology and RUN domain containing M2 Neighboring gene SLC25A34 and TMEM82 antisense RNA 1 Neighboring gene solute carrier family 25 member 34 Neighboring gene filamin binding LIM protein 1 Neighboring gene ribosomal protein L12 pseudogene 14

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Phenotypes

EBI GWAS Catalog

Description
Novel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population.
EBI GWAS Catalog

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by GOA

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001013641.3NP_001013663.1  transmembrane protein 82

    See identical proteins and their annotated locations for NP_001013663.1

    Status: VALIDATED

    Source sequence(s)
    AL450998, BC137239
    Consensus CDS
    CCDS30608.1
    UniProtKB/Swiss-Prot
    A0PJX8, Q5VVD4
    Related
    ENSP00000364938.1, ENST00000375782.2
    Conserved Domains (1) summary
    pfam15816
    Location:17313
    TMEM82; Transmembrane protein 82

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

    Range
    15742499..15747982
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060925.1 Alternate T2T-CHM13v2.0

    Range
    15187236..15192722
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)