U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

PF3D7_0616000 pyridoxal kinase [ Plasmodium falciparum 3D7 ]

Gene ID: 3885897, updated on 12-Sep-2024

Summary

Go to the top of the page Help
Gene symbol
PF3D7_0616000
Gene description
pyridoxal kinase
Locus tag
PF3D7_0616000
See related
PlasmoDB:PF3D7_0616000; VEuPathDB:PF3D7_0616000
Gene type
protein coding
RNA name
pyridoxal kinase
RefSeq status
PROVISIONAL
Organism
Plasmodium falciparum 3D7 (isolate: 3D7)
Lineage
Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania)
Orthologs
all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See PF3D7_0616000 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
3
Sequence:
Chromosome: 6; NC_004327.3 (669860..671632)

Chromosome 6 - NC_004327.3Genomic Context describing neighboring genes Neighboring gene conserved oligomeric Golgi complex subunit 4, putative Neighboring gene protein phosphatase, putative Neighboring gene conserved Plasmodium protein, unknown function Neighboring gene kinetochore protein NDC80, putative

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_004327.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Purification, crystallization and preliminary X-ray diffraction analysis of pyridoxal kinase from Plasmodium falciparum (PfPdxK). Kronenberger T, et al. Acta Crystallogr F Struct Biol Commun, 2014 Nov. PMID 25372829, Free PMC Article
  2. Analysis of the vitamin B6 biosynthesis pathway in the human malaria parasite Plasmodium falciparum. Wrenger C, et al. J Biol Chem, 2005 Feb 18. PMID 15590634
  3. Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13. Hall N, et al. Nature, 2002 Oct 3. PMID 12368867

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Pyridoxal kinase was purified and crystallized from Plasmodium falciparum.
    Title: Purification, crystallization and preliminary X-ray diffraction analysis of pyridoxal kinase from Plasmodium falciparum (PfPdxK).
Submit: New GeneRIF Correction

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by GeneDB

Function Evidence Code Pubs
enables ATP binding IDA
Inferred from Direct Assay
more info
 PubMed 
enables pyridoxal binding IDA
Inferred from Direct Assay
more info
 PubMed 
enables pyridoxamine binding IDA
Inferred from Direct Assay
more info
 PubMed 
enables pyridoxine binding IDA
Inferred from Direct Assay
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within phosphorylation IDA
Inferred from Direct Assay
more info
 PubMed 
acts_upstream_of_or_within response to singlet oxygen IDA
Inferred from Direct Assay
more info
 PubMed 
acts_upstream_of_or_within vitamin B6 biosynthetic process IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
pyridoxal kinase
XP_966146.1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_004327.3 Reference assembly

    Range
    669860..671632
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_961053.1 → XP_966146.1  pyridoxal kinase [Plasmodium falciparum 3D7]

    See identical proteins and their annotated locations for XP_966146.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0L7K7I4, A0A2I0BQ39, C6KT01
    Conserved Domains (2) summary
    NF033849
    Location:123 → 248
    ser_rich_anae_1; serine-rich protein
    cl00192
    Location:310 → 465
    ribokinase_pfkB_like; ribokinase/pfkB superfamily: Kinases that accept a wide variety of substrates, including carbohydrates and aromatic small molecules, all are phosphorylated at a hydroxyl group. The superfamily includes ribokinase, fructokinase, ketohexokinase, ...
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
6SU9_A.1
6SU9_B.1

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.