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ZNF761 zinc finger protein 761 [ Homo sapiens (human) ]

Gene ID: 388561, updated on 12-Oct-2019

Summary

Official Symbol
ZNF761provided by HGNC
Official Full Name
zinc finger protein 761provided by HGNC
Primary source
HGNC:HGNC:23179
See related
Ensembl:ENSG00000160336 Ensembl:ENSG00000286261
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
ZNF468
Expression
Broad expression in prostate (RPKM 24.8), placenta (RPKM 5.8) and 20 other tissues See more
Orthologs

Genomic context

See ZNF761 in Genome Data Viewer
Location:
19q13.42
Exon count:
7
Annotation release Status Assembly Chr Location
109.20190905 current GRCh38.p13 (GCF_000001405.39) 19 NC_000019.10 (53431984..53458261)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 19 NC_000019.9 (53935227..53961515)

Chromosome 19 - NC_000019.10Genomic Context describing neighboring genes Neighboring gene ZNF765-ZNF761 readthrough Neighboring gene zinc finger protein 765 Neighboring gene ribosomal protein L39 pseudogene 36 Neighboring gene vomeronasal 1 receptor 101 pseudogene Neighboring gene tropomyosin 3 pseudogene 9 Neighboring gene vomeronasal 1 receptor 102 pseudogene Neighboring gene zinc finger protein 813 Neighboring gene tropomyosin 3 pseudogene 6

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

HIV-1 interactions

Replication interactions

Interaction Pubs
Knockdown of zinc finger protein 761 (ZNF761) by siRNA enhances the early stages of HIV-1 replication in HeLa-CD4 cells infected with viral pseudotypes HIV89.6R and HIV8.2N PubMed

Go to the HIV-1, Human Interaction Database

Pathways from BioSystems

  • Gene Expression, organism-specific biosystem (from REACTOME)
    Gene Expression, organism-specific biosystemGene Expression covers the pathways by which genomic DNA is transcribed to yield RNA, the regulation of these transcription processes, and the pathways by which newly-made RNA Transcripts are process...
  • Generic Transcription Pathway, organism-specific biosystem (from REACTOME)
    Generic Transcription Pathway, organism-specific biosystemOVERVIEW OF TRANSCRIPTION REGULATION: Detailed studies of gene transcription regulation in a wide variety of eukaryotic systems has revealed the general principles and mechanisms by which cell- or t...

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Readthrough ZNF765-ZNF761

Readthrough gene: ZNF765-ZNF761, Included gene: ZNF765, Included gene: ZNF525

Homology

Clone Names

  • FLJ16231, FLJ35333, KIAA2033, MGC87789

Gene Ontology Provided by GOA

Function Evidence Code Pubs
DNA binding IEA
Inferred from Electronic Annotation
more info
 
metal ion binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
regulation of transcription, DNA-templated IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
nucleus IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
zinc finger protein 761
Names
zinc finger protein 468

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001008401.4NP_001008401.3  zinc finger protein 761 isoform a

    See identical proteins and their annotated locations for NP_001008401.3

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longest transcript and encodes the longer isoform (a). Variants 1, 2 and 3 all encode the same isoform.
    Source sequence(s)
    AB107355, AC022137, BM977910, DA237674
    UniProtKB/Swiss-Prot
    Q86XN6
    UniProtKB/TrEMBL
    A0A087WXT7
    Conserved Domains (4) summary
    COG5048
    Location:242617
    COG5048; FOG: Zn-finger [General function prediction only]
    COG5189
    Location:651737
    SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
    sd00017
    Location:328348
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam01352
    Location:748
    KRAB; KRAB box
  2. NM_001289951.2NP_001276880.1  zinc finger protein 761 isoform a

    See identical proteins and their annotated locations for NP_001276880.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 1. Variants 1, 2 and 3 all encode the same isoform (a).
    Source sequence(s)
    AC022137, BM977910, DA237674, DB232487
    UniProtKB/TrEMBL
    A0A087WXT7
    Related
    ENSP00000481272.1, ENST00000454407.5
    Conserved Domains (4) summary
    COG5048
    Location:242617
    COG5048; FOG: Zn-finger [General function prediction only]
    COG5189
    Location:651737
    SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
    sd00017
    Location:328348
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam01352
    Location:748
    KRAB; KRAB box
  3. NM_001289952.1NP_001276881.1  zinc finger protein 761 isoform a

    See identical proteins and their annotated locations for NP_001276881.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (3) differs in the 5' UTR compared to variant 1. Variants 1, 2 and 3 all encode the same isoform (a).
    Source sequence(s)
    AB107355, AC022137, BM977910, DB232487
    UniProtKB/Swiss-Prot
    Q86XN6
    UniProtKB/TrEMBL
    A0A087WXT7
    Related
    ENSP00000480218.1, ENST00000432094.6
    Conserved Domains (4) summary
    COG5048
    Location:242617
    COG5048; FOG: Zn-finger [General function prediction only]
    COG5189
    Location:651737
    SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
    sd00017
    Location:328348
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam01352
    Location:748
    KRAB; KRAB box
  4. NM_001289953.1NP_001276882.1  zinc finger protein 761 isoform b

    See identical proteins and their annotated locations for NP_001276882.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (4) differs in the 5' and 3' UTRs, and contains an alternate 3' terminal exon and thus differs in the 3' coding region, compared to variant 1. The encoded isoform (b) has a distinct C-terminus and is shorter than isoform a.
    Source sequence(s)
    BC071639, BC103708, DB232487
    Consensus CDS
    CCDS77353.1
    UniProtKB/TrEMBL
    Q6IQ01
    Related
    ENSP00000481271.1, ENST00000613950.1
    Conserved Domains (2) summary
    smart00349
    Location:850
    KRAB; krueppel associated box
    pfam01352
    Location:847
    KRAB; KRAB box

RNA

  1. NR_110551.2 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (5) uses an alternate splice site in an internal exon, and contains an alternate 3' terminal exon, compared to variant 1. This variant is represented as non-coding because the predicted protein does not meet RefSeq quality criteria.
    Source sequence(s)
    BC071639, BC103708, DA237674, DB232487
    Related
    ENST00000610928.4

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 109.20190905

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000019.10 Reference GRCh38.p13 Primary Assembly

    Range
    53431984..53458261
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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