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ZNF808 zinc finger protein 808 [ Homo sapiens (human) ]

Gene ID: 388558, updated on 4-Jun-2020

Summary

Official Symbol
ZNF808provided by HGNC
Official Full Name
zinc finger protein 808provided by HGNC
Primary source
HGNC:HGNC:33230
See related
Ensembl:ENSG00000198482
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Ubiquitous expression in thyroid (RPKM 3.0), spleen (RPKM 2.0) and 25 other tissues See more
Orthologs

Genomic context

See ZNF808 in Genome Data Viewer
Location:
19q13.41
Exon count:
10
Annotation release Status Assembly Chr Location
109.20200522 current GRCh38.p13 (GCF_000001405.39) 19 NC_000019.10 (52512747..52564464)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 19 NC_000019.9 (53030905..53059502)

Chromosome 19 - NC_000019.10Genomic Context describing neighboring genes Neighboring gene zinc finger protein 534 Neighboring gene DUT pseudogene Neighboring gene zinc finger protein 347 pseudogene Neighboring gene zinc finger protein 578 Neighboring gene ribosomal protein L39 pseudogene 34 Neighboring gene zinc finger protein 701 Neighboring gene zinc finger protein 137, pseudogene Neighboring gene zinc finger protein 83

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by GOA

Function Evidence Code Pubs
metal ion binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
regulation of transcription, DNA-templated IEA
Inferred from Electronic Annotation
more info
 

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001039886.4NP_001034975.2  zinc finger protein 808 isoform 1

    See identical proteins and their annotated locations for NP_001034975.2

    Status: VALIDATED

    Source sequence(s)
    AC022150, BC130353, CR749856, DA094254, DW462787
    Consensus CDS
    CCDS46167.1
    UniProtKB/Swiss-Prot
    Q8N4W9
    Related
    ENSP00000352846.4, ENST00000359798.9
    Conserved Domains (4) summary
    COG5048
    Location:397839
    COG5048; FOG: Zn-finger [General function prediction only]
    COG5189
    Location:816893
    SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
    sd00017
    Location:821841
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam01352
    Location:2464
    KRAB; KRAB box
  2. NM_001321424.1NP_001308353.1  zinc finger protein 808 isoform 1

    Status: VALIDATED

    Source sequence(s)
    AC022150, DB082169
    Consensus CDS
    CCDS46167.1
    UniProtKB/Swiss-Prot
    Q8N4W9
    Conserved Domains (4) summary
    COG5048
    Location:397839
    COG5048; FOG: Zn-finger [General function prediction only]
    COG5189
    Location:816893
    SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
    sd00017
    Location:821841
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam01352
    Location:2464
    KRAB; KRAB box
  3. NM_001321425.1NP_001308354.1  zinc finger protein 808 isoform 1

    Status: VALIDATED

    Source sequence(s)
    AC022150, CN411633, DB067429
    Consensus CDS
    CCDS46167.1
    UniProtKB/Swiss-Prot
    Q8N4W9
    Conserved Domains (4) summary
    COG5048
    Location:397839
    COG5048; FOG: Zn-finger [General function prediction only]
    COG5189
    Location:816893
    SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
    sd00017
    Location:821841
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam01352
    Location:2464
    KRAB; KRAB box
  4. NM_001363550.1NP_001350479.1  zinc finger protein 808 isoform 2

    Status: VALIDATED

    Source sequence(s)
    AC022150, BP871716, DB067429
    Consensus CDS
    CCDS86799.1
    Related
    ENSP00000420522.1, ENST00000487863.5
    Conserved Domains (3) summary
    COG5048
    Location:328770
    COG5048; FOG: Zn-finger [General function prediction only]
    COG5189
    Location:747824
    SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
    sd00017
    Location:752772
    ZF_C2H2; C2H2 Zn finger [structural motif]

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000019.10 Reference GRCh38.p13 Primary Assembly

    Range
    52512747..52564464
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024451509.1XP_024307277.1  zinc finger protein 808 isoform X2

    Conserved Domains (3) summary
    COG5048
    Location:328770
    COG5048; FOG: Zn-finger [General function prediction only]
    COG5189
    Location:747824
    SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
    sd00017
    Location:752772
    ZF_C2H2; C2H2 Zn finger [structural motif]
  2. XM_005258909.4XP_005258966.1  zinc finger protein 808 isoform X2

    See identical proteins and their annotated locations for XP_005258966.1

    UniProtKB/Swiss-Prot
    Q8N4W9
    Conserved Domains (3) summary
    COG5048
    Location:328770
    COG5048; FOG: Zn-finger [General function prediction only]
    COG5189
    Location:747824
    SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
    sd00017
    Location:752772
    ZF_C2H2; C2H2 Zn finger [structural motif]
  3. XM_024451508.1XP_024307276.1  zinc finger protein 808 isoform X1

    Conserved Domains (4) summary
    COG5048
    Location:397839
    COG5048; FOG: Zn-finger [General function prediction only]
    COG5189
    Location:816893
    SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
    sd00017
    Location:821841
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam01352
    Location:2464
    KRAB; KRAB box
  4. XM_024451506.1XP_024307274.1  zinc finger protein 808 isoform X1

    Conserved Domains (4) summary
    COG5048
    Location:397839
    COG5048; FOG: Zn-finger [General function prediction only]
    COG5189
    Location:816893
    SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
    sd00017
    Location:821841
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam01352
    Location:2464
    KRAB; KRAB box
  5. XM_024451507.1XP_024307275.1  zinc finger protein 808 isoform X1

    Conserved Domains (4) summary
    COG5048
    Location:397839
    COG5048; FOG: Zn-finger [General function prediction only]
    COG5189
    Location:816893
    SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
    sd00017
    Location:821841
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam01352
    Location:2464
    KRAB; KRAB box

RNA

  1. XR_935832.3 RNA Sequence

  2. XR_002958314.1 RNA Sequence

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