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NCU01961 DNA lyase Apn2 [ Neurospora crassa OR74A ]

Gene ID: 3880490, updated on 16-Nov-2023

Summary

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Gene symbol
NCU01961
Gene description
DNA lyase Apn2
Locus tag
NCU01961
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Neurospora crassa OR74A (strain: OR74A)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Sordariomycetidae; Sordariales; Sordariaceae; Neurospora
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Genomic context

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Location:
other: I
Exon count:
5
Sequence:
Chromosome: I; NC_026501.1 (1853043..1855879)

Linkage Group I - NC_026501.1Genomic Context describing neighboring genes Neighboring gene RING-9 protein Neighboring gene encodes anonymous transcript-6 Neighboring gene encodes anonymous transcript-5 Neighboring gene mating-type protein A-3 Neighboring gene mating-type protein A-2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_026501.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome sequence of the filamentous fungus Neurospora crassa. Galagan JE, et al. Nature, 2003 Apr 24. PMID 12712197

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA-(apurinic or apyrimidinic site) endonuclease activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables double-stranded DNA 3'-5' DNA exonuclease activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables endonuclease activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphoric diester hydrolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in base-excision repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
DNA lyase Apn2
DNA lyase Apn2, variant

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_026501.1 Reference assembly

    Range
    1853043..1855879
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011394609.1 → XP_011392911.1  DNA lyase Apn2 [Neurospora crassa OR74A]

    See identical proteins and their annotated locations for XP_011392911.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0B0DLN6, V5INX7
    Conserved Domains (1) summary
    cd09088
    Location:4 → 320
    Ape2-like_AP-endo; Human Ape2-like subfamily of the ExoIII family purinic/apyrimidinic (AP) endonucleases

  2. XM_011394608.1 → XP_011392910.1  DNA lyase Apn2, variant [Neurospora crassa OR74A]

    See identical proteins and their annotated locations for XP_011392910.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0B0DLN6, V5IQL8
    Conserved Domains (1) summary
    cd09088
    Location:1 → 290
    Ape2-like_AP-endo; Human Ape2-like subfamily of the ExoIII family purinic/apyrimidinic (AP) endonucleases
Nucleotide Protein
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