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ILDR2 immunoglobulin like domain containing receptor 2 [ Homo sapiens (human) ]

Gene ID: 387597, updated on 22-Aug-2021

Summary

Official Symbol
ILDR2provided by HGNC
Official Full Name
immunoglobulin like domain containing receptor 2provided by HGNC
Primary source
HGNC:HGNC:18131
See related
Ensembl:ENSG00000143195 MIM:618081
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
C1orf32; dJ782G3.1
Expression
Biased expression in testis (RPKM 6.6), brain (RPKM 4.2) and 3 other tissues See more
Orthologs
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Genomic context

See ILDR2 in Genome Data Viewer
Location:
1q24.1
Exon count:
15
Annotation release Status Assembly Chr Location
109.20210514 current GRCh38.p13 (GCF_000001405.39) 1 NC_000001.11 (166908187..166975540, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (166877424..166944777, complement)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene pogo transposable element derived with KRAB domain Neighboring gene transcriptional adaptor 1 Neighboring gene deoxyuridine triphosphatase pseudogene 6 Neighboring gene maelstrom spermatogenic transposon silencer Neighboring gene Sharpr-MPRA regulatory region 1052 Neighboring gene RNA, 5S ribosomal pseudogene 65 Neighboring gene uncharacterized LOC105371600 Neighboring gene glycoprotein A33

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

Phenotypes

Associated conditions

Description Tests
Genome-wide association study for refractive astigmatism reveals genetic co-determination with spherical equivalent refractive error: the CREAM consortium.
GeneReviews: Not available

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by GOA

Process Evidence Code Pubs
involved_in cell differentiation IEA
Inferred from Electronic Annotation
more info
 
involved_in homeostasis of number of cells within a tissue IEA
Inferred from Electronic Annotation
more info
 
involved_in insulin secretion IEA
Inferred from Electronic Annotation
more info
 
involved_in pancreas development IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in pancreas development IEA
Inferred from Electronic Annotation
more info
 
involved_in response to glucose IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 
located_in integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
is_active_in membrane IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 

General protein information

Preferred Names
immunoglobulin-like domain-containing receptor 2
Names
angulin-3

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_199351.3NP_955383.1  immunoglobulin-like domain-containing receptor 2 precursor

    See identical proteins and their annotated locations for NP_955383.1

    Status: VALIDATED

    Source sequence(s)
    AF503509, AL009182
    Consensus CDS
    CCDS1256.1
    UniProtKB/Swiss-Prot
    Q71H61
    Related
    ENSP00000271417.2, ENST00000271417.8
    Conserved Domains (2) summary
    pfam05624
    Location:186212
    LSR; Lipolysis stimulated receptor (LSR)
    cl11960
    Location:36166
    Ig; Immunoglobulin domain

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20210514

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p13 Primary Assembly

    Range
    166908187..166975540 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017001253.1XP_016856742.1  immunoglobulin-like domain-containing receptor 2 isoform X2

  2. XM_017001256.1XP_016856745.1  immunoglobulin-like domain-containing receptor 2 isoform X5

    Related
    ENSP00000436120.1, ENST00000525740.5
  3. XM_017001254.1XP_016856743.1  immunoglobulin-like domain-containing receptor 2 isoform X3

  4. XM_017001255.1XP_016856744.1  immunoglobulin-like domain-containing receptor 2 isoform X4

  5. XM_017001252.1XP_016856741.1  immunoglobulin-like domain-containing receptor 2 isoform X1

  6. XM_006711314.3XP_006711377.1  immunoglobulin-like domain-containing receptor 2 isoform X8

  7. XM_017001257.1XP_016856746.1  immunoglobulin-like domain-containing receptor 2 isoform X6

  8. XM_017001258.1XP_016856747.1  immunoglobulin-like domain-containing receptor 2 isoform X7

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