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NCU09560 superoxide dismutase [ Neurospora crassa OR74A ]

Gene ID: 3875632, updated on 12-Oct-2017

Summary

Gene symbol
NCU09560
Gene description
superoxide dismutase
Locus tag
NCU09560
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Neurospora crassa OR74A (strain: OR74A)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Sordariomycetidae; Sordariales; Sordariaceae; Neurospora

Genomic context

See NCU09560 in Genome Data Viewer
Location:
other: VII
Exon count:
3
Sequence:
Chromosome: VII; NC_026507.1 (998825..999910)

Linkage Group VII - NC_026507.1Genomic Context describing neighboring genes Neighboring gene tRNA Neighboring gene hypothetical protein Neighboring gene DNA replication complex GINS protein psf-3 Neighboring gene clock-controlled gene-9 Neighboring gene thymidylate synthase

Pathways from BioSystems

  • Peroxisome, organism-specific biosystem (from KEGG)
    Peroxisome, organism-specific biosystemPeroxisomes are essential organelles that play a key role in redox signalling and lipid homeostasis. They contribute to many crucial metabolic processes such as fatty acid oxidation, biosynthesis of ...
  • Peroxisome, conserved biosystem (from KEGG)
    Peroxisome, conserved biosystemPeroxisomes are essential organelles that play a key role in redox signalling and lipid homeostasis. They contribute to many crucial metabolic processes such as fatty acid oxidation, biosynthesis of ...

General gene information

Homology

  • Homologs of the NCU09560 gene: The NCU09560 gene is conserved in human, chimpanzee, Rhesus monkey, dog, cow, mouse, rat, chicken, zebrafish, fruit fly, mosquito, C.elegans, S.cerevisiae, K.lactis, E.gossypii, S.pombe, M.oryzae, N.crassa, A.thaliana, rice, and frog.

General protein information

Names
superoxide dismutase
superoxide dismutase, variant

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_026507.1 Reference assembly

    Range
    998825..999910
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011396998.1XP_011395300.1  superoxide dismutase [Neurospora crassa OR74A]

    See identical proteins and their annotated locations for XP_011395300.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    V5IKH7
    Conserved Domains (3) summary
    COG0605
    Location:58256
    SodA; Superoxide dismutase [Inorganic ion transport and metabolism]
    pfam00081
    Location:62141
    Sod_Fe_N; Iron/manganese superoxide dismutases, alpha-hairpin domain
    pfam02777
    Location:151253
    Sod_Fe_C; Iron/manganese superoxide dismutases, C-terminal domain
  2. XM_011396999.1XP_011395301.1  superoxide dismutase, variant [Neurospora crassa OR74A]

    See identical proteins and their annotated locations for XP_011395301.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    V5IKC6
    Conserved Domains (3) summary
    COG0605
    Location:30228
    SodA; Superoxide dismutase [Inorganic ion transport and metabolism]
    pfam00081
    Location:34113
    Sod_Fe_N; Iron/manganese superoxide dismutases, alpha-hairpin domain
    pfam02777
    Location:123225
    Sod_Fe_C; Iron/manganese superoxide dismutases, C-terminal domain
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