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NCU09118 DNA topoisomerase I [ Neurospora crassa OR74A ]

Gene ID: 3874180, updated on 10-Sep-2016

Summary

Gene symbol
NCU09118
Gene description
DNA topoisomerase I
Locus tag
NCU09118
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Neurospora crassa OR74A (strain: OR74A)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Sordariomycetidae; Sordariales; Sordariaceae; Neurospora

Genomic context

See NCU09118 in Genome Data Viewer
Location:
other: I
Exon count:
5
Sequence:
Chromosome: I; NC_026501.1 (5389944..5394388, complement)

Linkage Group I - NC_026501.1Genomic Context describing neighboring genes Neighboring gene cytochrome P450 52A11 Neighboring gene aromatic aminotransferase Aro8 Neighboring gene ncRNA Neighboring gene extracellular cell wall glucanase Crf1 Neighboring gene ATP synthase subunit gamma Neighboring gene lysine-specific histone demethylase Aof2 Neighboring gene vacuolar sorting protein

General gene information

Homology

  • Homologs of the NCU09118 gene: The NCU09118 gene is conserved in human, chimpanzee, Rhesus monkey, dog, cow, mouse, rat, chicken, zebrafish, fruit fly, mosquito, C.elegans, S.cerevisiae, K.lactis, E.gossypii, S.pombe, M.oryzae, N.crassa, A.thaliana, rice, and frog.

General protein information

Names
DNA topoisomerase I
DNA topoisomerase I, variant

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_026501.1 Reference assembly

    Range
    5389944..5394388 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011394939.1XP_011393241.1  DNA topoisomerase I, variant [Neurospora crassa OR74A]

    See identical proteins and their annotated locations for XP_011393241.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    V5IPM9
    Conserved Domains (4) summary
    smart00435
    Location:411862
    TOPEUc; DNA Topoisomerase I (eukaryota)
    pfam01028
    Location:483682
    Topoisom_I; Eukaryotic DNA topoisomerase I, catalytic core
    pfam02919
    Location:257480
    Topoisom_I_N; Eukaryotic DNA topoisomerase I, DNA binding fragment
    pfam14370
    Location:821883
    Topo_C_assoc; C-terminal topoisomerase domain
  2. XM_011394940.1XP_011393242.1  DNA topoisomerase I [Neurospora crassa OR74A]

    See identical proteins and their annotated locations for XP_011393242.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    V5IQ16
    Conserved Domains (4) summary
    smart00435
    Location:441892
    TOPEUc; DNA Topoisomerase I (eukaryota)
    pfam01028
    Location:513712
    Topoisom_I; Eukaryotic DNA topoisomerase I, catalytic core
    pfam02919
    Location:287510
    Topoisom_I_N; Eukaryotic DNA topoisomerase I, DNA binding fragment
    pfam14370
    Location:851913
    Topo_C_assoc; C-terminal topoisomerase domain
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