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cdh-1 cellobiose dehydrogenase-1 [ Neurospora crassa OR74A ]

Gene ID: 3872738, updated on 6-Jun-2024
Gene symbol
cdh-1
Gene description
cellobiose dehydrogenase-1
Locus tag
NCU00206
See related
FungiDB:NCU00206; VEuPathDB:NCU00206
Gene type
protein coding
RNA name
cellobiose dehydrogenase
RefSeq status
PROVISIONAL
Organism
Neurospora crassa OR74A (strain: OR74A)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Sordariomycetidae; Sordariales; Sordariaceae; Neurospora
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See cdh-1 in Genome Data Viewer
Location:
other: III
Exon count:
4
Sequence:
Chromosome: III; NC_026503.1 (3004156..3008108, complement)

Linkage Group III - NC_026503.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene SIR2 family histone deacetylase Neighboring gene hypothetical protein Neighboring gene tRNA-Arg Neighboring gene oxidoreductase

Genomic Sequence:
NC_026503.1

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. The genome sequence of the filamentous fungus Neurospora crassa. Galagan JE, et al. Nature, 2003 Apr 24. PMID 12712197
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cellulose binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables flavin adenine dinucleotide binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity, acting on CH-OH group of donors IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 
Names
cellobiose dehydrogenase

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_026503.1 Reference assembly

    Range
    3004156..3008108 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_951498.2 → XP_956591.1  cellobiose dehydrogenase [Neurospora crassa OR74A]

    See identical proteins and their annotated locations for XP_956591.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    Q7RXM0
    Conserved Domains (5) summary
    COG2303
    Location:270 → 788
    BetA; Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only]
    pfam00734
    Location:797 → 825
    CBM_1; Fungal cellulose binding domain
    pfam05199
    Location:647 → 782
    GMC_oxred_C; GMC oxidoreductase
    pfam16010
    Location:30 → 218
    CDH-cyt; Cytochrome domain of cellobiose dehydrogenase
    cl21454
    Location:333 → 554
    NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins
Nucleotide Protein
Heading Accession and Version

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