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ASCL1 achaete-scute family bHLH transcription factor 1 [ Gallus gallus (chicken) ]

Gene ID: 386573, updated on 2-Sep-2020

Summary

Official Symbol
ASCL1provided by CGNC
Official Full Name
achaete-scute family bHLH transcription factor 1provided by CGNC
Primary source
CGNC:49152
See related
Ensembl:ENSGALG00000037082
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as
CASH1
Annotation information
Annotation category: partial on reference assembly
Orthologs

Genomic context

See ASCL1 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
2
Annotation release Status Assembly Chr Location
104 current GRCg6a (GCF_000002315.5) 1 NC_006088.5 (55066360..55068371, complement)
103 previous assembly Gallus_gallus-5.0 (GCF_000002315.4) 1 NC_006088.4 (55116730..55118741, complement)

Chromosome 1 - NC_006088.5Genomic Context describing neighboring genes Neighboring gene 5'-nucleotidase domain containing 3 Neighboring gene stabilin 2 Neighboring gene uncharacterized LOC107053530 Neighboring gene phenylalanine hydroxylase Neighboring gene tyrosine hydroxylase-like

Genomic regions, transcripts, and products

Bibliography

Pathways from PubChem

General protein information

Preferred Names
achaete-scute homolog 1
Names
achaete-scute complex homolog 1
achaete-scute complex-like 1

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_204412.1NP_989743.1  achaete-scute homolog 1

    See identical proteins and their annotated locations for NP_989743.1

    Status: PROVISIONAL

    Source sequence(s)
    U01339
    UniProtKB/TrEMBL
    Q90575
    Related
    ENSGALP00000047577.1, ENSGALT00000069263.2
    Conserved Domains (1) summary
    smart00353
    Location:117159
    HLH; helix loop helix domain

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCg6a Primary Assembly

Genomic

  1. NC_006088.5 Reference GRCg6a Primary Assembly

    Range
    55066360..55068371 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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