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Oseg2 Outer segment 2 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 38282, updated on 28-Aug-2019

Summary

Official Symbol
Oseg2provided by FlyBase
Official Full Name
Outer segment 2provided by FlyBase
Primary source
FLYBASE:FBgn0035317
Locus tag
Dmel_CG13809
Gene type
protein coding
RNA name
outer segment 2
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CG13809; Dmel\CG13809; IFT172; OSEG; oseg2; OSEG2; osm-1; OSM-1

Genomic context

See Oseg2 in Genome Data Viewer
Location:
62D3-62D3; 3-2 cM
Exon count:
5
Annotation release Status Assembly Chr Location
Release 6.26 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (2229646..2235253)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (2229646..2235253)

Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene Adenylyl cyclase X D

Genomic regions, transcripts, and products

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
cilium assembly IEP
Inferred from Expression Pattern
more info
PubMed 
cilium assembly ISM
Inferred from Sequence Model
more info
PubMed 
cilium assembly ISS
Inferred from Sequence or Structural Similarity
more info
 
intraciliary transport IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
intraciliary transport IMP
Inferred from Mutant Phenotype
more info
PubMed 
non-motile cilium assembly IMP
Inferred from Mutant Phenotype
more info
PubMed 
Component Evidence Code Pubs
axoneme IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
ciliary basal body IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
cilium ISS
Inferred from Sequence or Structural Similarity
more info
 
intraciliary transport particle ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
intraciliary transport particle B IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
non-motile cilium IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
outer segment 2
Names
CG13809-PB
Oseg2-PB
osm-1
selective LIM binding factor

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_037436.4 Reference assembly

    Range
    2229646..2235253
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_139443.2NP_647700.2  outer segment 2 [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_647700.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9W040
    Related
    FBpp0304907, FBtr0332661
    Conserved Domains (4) summary
    COG2319
    Location:19325
    WD40; WD40 repeat [General function prediction only]
    PRK12798
    Location:12121393
    PRK12798; chemotaxis protein; Reviewed
    sd00039
    Location:1963
    7WD40; WD40 repeat [structural motif]
    cl02567
    Location:18313
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
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